BLASTX nr result

ID: Cnidium21_contig00039931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039931
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592692.1| Fibrillarin [Medicago truncatula] gi|3583453...    57   3e-06
ref|XP_003552116.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    55   1e-05
ref|XP_003523175.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    55   1e-05

>ref|XP_003592692.1| Fibrillarin [Medicago truncatula] gi|358345300|ref|XP_003636719.1|
           Fibrillarin [Medicago truncatula]
           gi|355481740|gb|AES62943.1| Fibrillarin [Medicago
           truncatula] gi|355502654|gb|AES83857.1| Fibrillarin
           [Medicago truncatula] gi|388494564|gb|AFK35348.1|
           unknown [Medicago truncatula]
          Length = 313

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
 Frame = -1

Query: 557 AVFYLRAGGHYMISTQVNDIDLTSQGKDPFA---NYHRWMEFNPIEVVMLEPIMREYVMA 387
           A +YL+AGGH++IS + N ID T   +  F+   N  +  +F P+E V LEP  R++   
Sbjct: 240 ASYYLKAGGHFVISIKANCIDSTVPAEAVFSAEVNKLKADQFKPMEQVTLEPFERDHACV 299

Query: 386 VGGFRVPEE 360
           VGG+RVP++
Sbjct: 300 VGGYRVPKK 308


>ref|XP_003552116.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 313

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = -1

Query: 557 AVFYLRAGGHYMISTQVNDIDLTSQGKDPF---ANYHRWMEFNPIEVVMLEPIMREYVMA 387
           A +YL+AGGH++IS + N ID T   +  F    N  +  +F P E V LEP  R++   
Sbjct: 239 ASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACV 298

Query: 386 VGGFRVPEE 360
           VGG+R+P++
Sbjct: 299 VGGYRMPKK 307


>ref|XP_003523175.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 306

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
 Frame = -1

Query: 557 AVFYLRAGGHYMISTQVNDIDLTSQGKDPF---ANYHRWMEFNPIEVVMLEPIMREYVMA 387
           A +YL+AGGH++IS + N ID T   +  F    N  +  +F P E V LEP  R++   
Sbjct: 232 ASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACV 291

Query: 386 VGGFRVPEE 360
           VGG+R+P++
Sbjct: 292 VGGYRMPKK 300


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