BLASTX nr result

ID: Cnidium21_contig00039920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039920
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    82   2e-27
ref|XP_003605542.1| Helicase-like protein [Medicago truncatula] ...    83   5e-25
ref|XP_003605523.1| Helicase-like protein [Medicago truncatula] ...    83   5e-25
ref|XP_003605521.1| Helicase-like protein [Medicago truncatula] ...    83   5e-25
ref|XP_002463339.1| hypothetical protein SORBIDRAFT_02g042016 [S...    86   1e-24

>ref|XP_003595507.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
            gi|355484555|gb|AES65758.1| ATP-dependent DNA helicase
            PIF1 [Medicago truncatula]
          Length = 1873

 Score = 82.4 bits (202), Expect(2) = 2e-27
 Identities = 40/77 (51%), Positives = 52/77 (67%)
 Frame = -1

Query: 368  KRYMNQNFLDALAICRAIGHPDIFLTMTANPKWPEIQQMLDHTPRLTANDAPDVVTRVFK 189
            +RYM  N  DA+AIC+  G+PD+F+T+T N  W EIQ  L     L A+D PD+V RVFK
Sbjct: 835  RRYMFNNCQDAMAICKKYGYPDMFVTITCNSNWREIQDFLKER-NLKASDRPDIVCRVFK 893

Query: 188  LKLDQLIHLIKKKNFFG 138
            +KLD+L+   KKK  FG
Sbjct: 894  MKLDKLMDDFKKKELFG 910



 Score = 65.1 bits (157), Expect(2) = 2e-27
 Identities = 27/53 (50%), Positives = 41/53 (77%)
 Frame = -3

Query: 159  KEKKLFWSLYWSMHVIEFQKRGLPHAHMVIWLHSDSKPKTTQQVDAMVSAEIP 1
            K+K+LF  +   M+ +EFQKRGLPHAH+++WL S++K KT   +D ++SAE+P
Sbjct: 904  KKKELFGKVDAGMYTVEFQKRGLPHAHILVWLSSENKLKTGADIDKIISAELP 956


>ref|XP_003605542.1| Helicase-like protein [Medicago truncatula]
           gi|355506597|gb|AES87739.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1641

 Score = 83.2 bits (204), Expect(2) = 5e-25
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = -1

Query: 365 RYMNQNFLDALAICRAIGHPDIFLTMTANPKWPEIQQMLDHTPRLTANDAPDVVTRVFKL 186
           RYM QN+ DA+AIC  +G+PD+F+T T N KWPE+   L     L   D PD+V+R+FK+
Sbjct: 551 RYMIQNYQDAMAICGWVGYPDLFITFTCNHKWPELVDFL-KKHNLKPEDRPDLVSRLFKI 609

Query: 185 KLDQLIHLIKKKNFFG 138
           KLD LI  IKK   FG
Sbjct: 610 KLDHLIKYIKKGKIFG 625



 Score = 56.2 bits (134), Expect(2) = 5e-25
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = -3

Query: 159 KEKKLFWSLYWSMHVIEFQKRGLPHAHMVIWLHSDSKPKTTQQVDAMVSAEIP 1
           K+ K+F  +   ++ IEFQKRG+PHAH++++L  +S+ K   Q+D ++SAEIP
Sbjct: 619 KKGKIFGKVKAVIYTIEFQKRGIPHAHILVFLRPESRCKHPNQIDKIISAEIP 671


>ref|XP_003605523.1| Helicase-like protein [Medicago truncatula]
           gi|355506578|gb|AES87720.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1585

 Score = 83.2 bits (204), Expect(2) = 5e-25
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = -1

Query: 365 RYMNQNFLDALAICRAIGHPDIFLTMTANPKWPEIQQMLDHTPRLTANDAPDVVTRVFKL 186
           RYM QN+ DA+AIC  +G+PD+F+T T N KWPE+   L     L   D PD+V+R+FK+
Sbjct: 551 RYMIQNYQDAMAICGWVGYPDLFITFTCNHKWPELVDFL-KKHNLKPEDRPDLVSRLFKI 609

Query: 185 KLDQLIHLIKKKNFFG 138
           KLD LI  IKK   FG
Sbjct: 610 KLDHLIKYIKKGKIFG 625



 Score = 56.2 bits (134), Expect(2) = 5e-25
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = -3

Query: 159 KEKKLFWSLYWSMHVIEFQKRGLPHAHMVIWLHSDSKPKTTQQVDAMVSAEIP 1
           K+ K+F  +   ++ IEFQKRG+PHAH++++L  +S+ K   Q+D ++SAEIP
Sbjct: 619 KKGKIFGKVKAVIYTIEFQKRGIPHAHILVFLRPESRCKHPNQIDKIISAEIP 671


>ref|XP_003605521.1| Helicase-like protein [Medicago truncatula]
           gi|355506576|gb|AES87718.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1262

 Score = 83.2 bits (204), Expect(2) = 5e-25
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = -1

Query: 365 RYMNQNFLDALAICRAIGHPDIFLTMTANPKWPEIQQMLDHTPRLTANDAPDVVTRVFKL 186
           RYM QN+ DA+AIC  +G+PD+F+T T N KWPE+   L     L   D PD+V+R+FK+
Sbjct: 551 RYMIQNYQDAMAICGWVGYPDLFITFTCNHKWPELVDFL-KKHNLKPEDRPDLVSRLFKI 609

Query: 185 KLDQLIHLIKKKNFFG 138
           KLD LI  IKK   FG
Sbjct: 610 KLDHLIKYIKKGKIFG 625



 Score = 56.2 bits (134), Expect(2) = 5e-25
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = -3

Query: 159 KEKKLFWSLYWSMHVIEFQKRGLPHAHMVIWLHSDSKPKTTQQVDAMVSAEIP 1
           K+ K+F  +   ++ IEFQKRG+PHAH++++L  +S+ K   Q+D ++SAEIP
Sbjct: 619 KKGKIFGKVKAVIYTIEFQKRGIPHAHILVFLRPESRCKHPNQIDKIISAEIP 671


>ref|XP_002463339.1| hypothetical protein SORBIDRAFT_02g042016 [Sorghum bicolor]
           gi|241926716|gb|EER99860.1| hypothetical protein
           SORBIDRAFT_02g042016 [Sorghum bicolor]
          Length = 1261

 Score = 86.3 bits (212), Expect(2) = 1e-24
 Identities = 39/77 (50%), Positives = 53/77 (68%)
 Frame = -1

Query: 368 KRYMNQNFLDALAICRAIGHPDIFLTMTANPKWPEIQQMLDHTPRLTANDAPDVVTRVFK 189
           +RYM QN+ D +AICR  G PD+F+T T NPKWPEI +ML    +   ND PD++ RVF 
Sbjct: 287 RRYMIQNYHDGIAICRVYGPPDLFITFTCNPKWPEILEMLLEGQQ--PNDRPDIIVRVFH 344

Query: 188 LKLDQLIHLIKKKNFFG 138
           +KL +L+H I+  + FG
Sbjct: 345 MKLQELLHDIENSDIFG 361



 Score = 51.6 bits (122), Expect(2) = 1e-24
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = -3

Query: 123 MHVIEFQKRGLPHAHMVIWLHSDSKPKTTQQVDAMVSAEIP 1
           ++ IEFQKRGLPHAH+++WL       T + +D ++SAEIP
Sbjct: 367 LYCIEFQKRGLPHAHILVWLAKSKINVTYETIDRLISAEIP 407


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