BLASTX nr result

ID: Cnidium21_contig00039917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039917
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltran...    94   2e-17
emb|CBI39767.3| unnamed protein product [Vitis vinifera]               94   2e-17
emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]    94   2e-17
gb|ABR18374.1| unknown [Picea sitchensis] gi|224286369|gb|ACN408...    89   5e-16
ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltran...    87   1e-15

>ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Vitis vinifera]
          Length = 633

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -2

Query: 188 MLTNIKEQDDDFRLLTPQELKEEAQGPPDLPRLQRRIKEIVRVLSNFKTLRQEGASRKDY 9
           M  NIKE+ D+FRL T +EL+EEA+ PPDLP LQRRIKEIVRVLSNF +LRQEGA RKDY
Sbjct: 135 MQLNIKEESDEFRLPTKEELQEEARQPPDLPNLQRRIKEIVRVLSNFNSLRQEGAQRKDY 194

Query: 8   V 6
           V
Sbjct: 195 V 195


>emb|CBI39767.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -2

Query: 188 MLTNIKEQDDDFRLLTPQELKEEAQGPPDLPRLQRRIKEIVRVLSNFKTLRQEGASRKDY 9
           M  NIKE+ D+FRL T +EL+EEA+ PPDLP LQRRIKEIVRVLSNF +LRQEGA RKDY
Sbjct: 135 MQLNIKEESDEFRLPTKEELQEEARQPPDLPNLQRRIKEIVRVLSNFNSLRQEGAQRKDY 194

Query: 8   V 6
           V
Sbjct: 195 V 195


>emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]
          Length = 741

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -2

Query: 188 MLTNIKEQDDDFRLLTPQELKEEAQGPPDLPRLQRRIKEIVRVLSNFKTLRQEGASRKDY 9
           M  NIKE+ D+FRL T +EL+EEA+ PPDLP LQRRIKEIVRVLSNF +LRQEGA RKDY
Sbjct: 137 MQLNIKEESDEFRLPTKEELQEEARQPPDLPNLQRRIKEIVRVLSNFNSLRQEGAQRKDY 196

Query: 8   V 6
           V
Sbjct: 197 V 197


>gb|ABR18374.1| unknown [Picea sitchensis] gi|224286369|gb|ACN40892.1| unknown
           [Picea sitchensis]
          Length = 641

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -2

Query: 179 NIKEQDDDFRLLTPQELKEEAQGPPDLPRLQRRIKEIVRVLSNFKTLRQEGASRKDYVN 3
           NI+E+ DDFRL T QEL++E + PPDL  L+RRIKE+VRVLSNFK LRQEG +RKDYVN
Sbjct: 131 NIQEEPDDFRLPTAQELEDEGKQPPDLQNLKRRIKEVVRVLSNFKALRQEGTTRKDYVN 189


>ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Cucumis sativus] gi|449484971|ref|XP_004157033.1|
           PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
           methyltransferase NOP2-like [Cucumis sativus]
          Length = 611

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = -2

Query: 188 MLTNIKEQDDDFRLLTPQELKEEAQGPPDLPRLQRRIKEIVRVLSNFKTLRQEGASRKDY 9
           M  NIK++ D+FRL T +EL+EE+  PPDL  LQRRI+EIVRVLSNFK LRQEGA+RKDY
Sbjct: 128 MQLNIKDESDEFRLPTKEELEEESLRPPDLSSLQRRIREIVRVLSNFKALRQEGATRKDY 187

Query: 8   V 6
           V
Sbjct: 188 V 188


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