BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039913
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-bin...    53   1e-12
ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus...    48   5e-12
ref|XP_002315325.1| predicted protein [Populus trichocarpa] gi|2...    45   3e-10
ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein ...    45   4e-10
ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arab...    45   4e-10

>ref|XP_002265627.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
           protein 1 [Vitis vinifera] gi|147789032|emb|CAN75783.1|
           hypothetical protein VITISV_022491 [Vitis vinifera]
          Length = 250

 Score = 52.8 bits (125), Expect(2) = 1e-12
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = +2

Query: 50  LHRLSTQSGKSAPSKFTIYISNLDYSLADSVLFTIFTTFRK 172
           L + S+ SG  APSK T+Y+SNLDY+L +S LFTIF+TF K
Sbjct: 36  LQKRSSGSGSLAPSKSTVYVSNLDYTLTNSDLFTIFSTFGK 76



 Score = 45.1 bits (105), Expect(2) = 1e-12
 Identities = 24/56 (42%), Positives = 34/56 (60%)
 Frame = +3

Query: 174 EVAKFAMLKHSESRQAHFVTFIPVISIEDAINAFNGMNETIPINRTLTTSVAADNG 341
           +VAK  +LK   +R +  V F+  +S ++AI A   MN  +   RTLT S+AADNG
Sbjct: 76  KVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAREMNGKVLNKRTLTASIAADNG 131


>ref|XP_002529595.1| RNA binding motif protein, putative [Ricinus communis]
           gi|223530928|gb|EEF32787.1| RNA binding motif protein,
           putative [Ricinus communis]
          Length = 217

 Score = 47.8 bits (112), Expect(2) = 5e-12
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = +2

Query: 62  STQSGKSAPSKFTIYISNLDYSLADSVLFTIFTTFRK 172
           S  SG  APSK T+Y+SNLDYSL +S L T+F+TF K
Sbjct: 40  SNGSGGLAPSKSTVYVSNLDYSLTNSDLHTLFSTFGK 76



 Score = 47.8 bits (112), Expect(2) = 5e-12
 Identities = 23/56 (41%), Positives = 38/56 (67%)
 Frame = +3

Query: 174 EVAKFAMLKHSESRQAHFVTFIPVISIEDAINAFNGMNETIPINRTLTTSVAADNG 341
           ++A+  +LK  +SRQ+  V FI  +S +DA++A   M++ I   RTL+ S+A+DNG
Sbjct: 76  KIARVTVLKDKQSRQSKGVAFIQFVSRDDAVSAAKQMDKKILNGRTLSASIASDNG 131


>ref|XP_002315325.1| predicted protein [Populus trichocarpa] gi|222864365|gb|EEF01496.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score = 45.1 bits (105), Expect(2) = 3e-10
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +2

Query: 71  SGKSAPSKFTIYISNLDYSLADSVLFTIFTTFRK 172
           SG  APSK T+Y+SNLD+SL +S L T+F+TF K
Sbjct: 1   SGGLAPSKSTLYVSNLDFSLTNSDLHTLFSTFGK 34



 Score = 44.7 bits (104), Expect(2) = 3e-10
 Identities = 23/56 (41%), Positives = 35/56 (62%)
 Frame = +3

Query: 174 EVAKFAMLKHSESRQAHFVTFIPVISIEDAINAFNGMNETIPINRTLTTSVAADNG 341
           +VA+  +LK   +R++  V FI  +S  DA+ A   M++ I   RTL+ S+AADNG
Sbjct: 34  KVARVTVLKDRTTRKSRGVAFIQFVSRSDAVTAVEQMDKKILNGRTLSASIAADNG 89


>ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
           thaliana] gi|12322795|gb|AAG51392.1|AC011560_24
           hypothetical protein; 114721-113936 [Arabidopsis
           thaliana] gi|54261729|gb|AAV31168.1| At3g10400
           [Arabidopsis thaliana] gi|61656137|gb|AAX49371.1|
           At3g10400 [Arabidopsis thaliana]
           gi|332641379|gb|AEE74900.1| small nuclear
           ribonucleoprotein 31 kDa protein [Arabidopsis thaliana]
          Length = 261

 Score = 44.7 bits (104), Expect(2) = 4e-10
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +3

Query: 174 EVAKFAMLKHSESRQAHFVTFIPVISIEDAINAFNGMNETIPINRTLTTSVAADNG 341
           +VA+  +LK   +RQ+  V F+  +S EDA  A   M+  I   R LT S+AADNG
Sbjct: 82  KVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKLTVSIAADNG 137



 Score = 44.3 bits (103), Expect(2) = 4e-10
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = +2

Query: 71  SGKSAPSKFTIYISNLDYSLADSVLFTIFTTFRK 172
           SG  APSK T+Y+SNLD+SL +S + T+F+TF K
Sbjct: 49  SGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGK 82


>ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
           lyrata] gi|297328506|gb|EFH58925.1| hypothetical protein
           ARALYDRAFT_897216 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score = 44.7 bits (104), Expect(2) = 4e-10
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +3

Query: 174 EVAKFAMLKHSESRQAHFVTFIPVISIEDAINAFNGMNETIPINRTLTTSVAADNG 341
           +VA+  +LK   +RQ+  V F+  +S EDA  A   M+  I   R LT S+AADNG
Sbjct: 82  KVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAARSMDAKILNGRKLTVSIAADNG 137



 Score = 44.3 bits (103), Expect(2) = 4e-10
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = +2

Query: 71  SGKSAPSKFTIYISNLDYSLADSVLFTIFTTFRK 172
           SG  APSK T+Y+SNLD+SL +S + T+F+TF K
Sbjct: 49  SGGLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGK 82