BLASTX nr result

ID: Cnidium21_contig00039868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039868
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   103   2e-20
ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216...   103   2e-20
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   102   3e-20
dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana]               100   2e-19
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    99   3e-19

>ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229082 [Cucumis sativus]
          Length = 802

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = +3

Query: 39  AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218
           AEAEYR+L+  + E+IWL+ LL++LQ++V TP  +YC+N AA YIA N +F ERTKH+++
Sbjct: 257 AEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIEL 316

Query: 219 DCHFVRDYVTSGFIKIYHIRTFLQLA 296
           DCHFVRD VT   IK+  IR+  QLA
Sbjct: 317 DCHFVRDRVTDESIKLLPIRSTHQLA 342


>ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216505 [Cucumis sativus]
          Length = 907

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/86 (56%), Positives = 66/86 (76%)
 Frame = +3

Query: 39  AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218
           AEAEYR+L+  + E+IWL+ LL++LQ++V TP  +YC+N AA YIA N +F ERTKH+++
Sbjct: 626 AEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIEL 685

Query: 219 DCHFVRDYVTSGFIKIYHIRTFLQLA 296
           DCHFVRD VT   IK+  IR+  QLA
Sbjct: 686 DCHFVRDRVTDESIKLLPIRSTHQLA 711


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/86 (54%), Positives = 61/86 (70%)
 Frame = +3

Query: 39   AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218
            AEAEYRSLS  T EL+WL   L++LQV +  P  L+CDN AA +IA N +F ERTKH++ 
Sbjct: 1202 AEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIES 1261

Query: 219  DCHFVRDYVTSGFIKIYHIRTFLQLA 296
            DCH VR+ +  G  ++YHI T LQ+A
Sbjct: 1262 DCHSVRERLLKGLFELYHINTELQIA 1287


>dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana]
          Length = 509

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/85 (51%), Positives = 62/85 (72%)
 Frame = +3

Query: 42  EAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKID 221
           EAEYRS++  T EL+WL  +L+DL V++   + L+CDN +A +IA N +F ERTKH++ID
Sbjct: 388 EAEYRSMAVATKELLWLAQMLKDLHVEMEFQVKLFCDNKSAMHIANNSVFHERTKHVEID 447

Query: 222 CHFVRDYVTSGFIKIYHIRTFLQLA 296
           CH  RD V +GF+K+ H+ T  QLA
Sbjct: 448 CHTTRDRVKNGFLKVLHVDTENQLA 472


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/86 (55%), Positives = 62/86 (72%)
 Frame = +3

Query: 39   AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218
            AEAEYR+++ TT ELIWL+GLL DL  K   P+ L+CDN AA YIA N +F ERTKH+++
Sbjct: 1136 AEAEYRAMASTTCELIWLQGLLNDLGFKRTLPMPLFCDNQAAIYIASNPVFHERTKHIEM 1195

Query: 219  DCHFVRDYVTSGFIKIYHIRTFLQLA 296
            DCHFVR+   S  I+   +R+  QLA
Sbjct: 1196 DCHFVREKTQSDVIQHVFVRSTDQLA 1221


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