BLASTX nr result
ID: Cnidium21_contig00039868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00039868 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 103 2e-20 ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216... 103 2e-20 gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 102 3e-20 dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] 100 2e-19 gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest... 99 3e-19 >ref|XP_004163499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101229082 [Cucumis sativus] Length = 802 Score = 103 bits (256), Expect = 2e-20 Identities = 49/86 (56%), Positives = 66/86 (76%) Frame = +3 Query: 39 AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218 AEAEYR+L+ + E+IWL+ LL++LQ++V TP +YC+N AA YIA N +F ERTKH+++ Sbjct: 257 AEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIEL 316 Query: 219 DCHFVRDYVTSGFIKIYHIRTFLQLA 296 DCHFVRD VT IK+ IR+ QLA Sbjct: 317 DCHFVRDRVTDESIKLLPIRSTHQLA 342 >ref|XP_004147195.1| PREDICTED: uncharacterized protein LOC101216505 [Cucumis sativus] Length = 907 Score = 103 bits (256), Expect = 2e-20 Identities = 49/86 (56%), Positives = 66/86 (76%) Frame = +3 Query: 39 AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218 AEAEYR+L+ + E+IWL+ LL++LQ++V TP +YC+N AA YIA N +F ERTKH+++ Sbjct: 626 AEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIEL 685 Query: 219 DCHFVRDYVTSGFIKIYHIRTFLQLA 296 DCHFVRD VT IK+ IR+ QLA Sbjct: 686 DCHFVRDRVTDESIKLLPIRSTHQLA 711 >gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gb|U12626) [Arabidopsis thaliana] Length = 1315 Score = 102 bits (254), Expect = 3e-20 Identities = 47/86 (54%), Positives = 61/86 (70%) Frame = +3 Query: 39 AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218 AEAEYRSLS T EL+WL L++LQV + P L+CDN AA +IA N +F ERTKH++ Sbjct: 1202 AEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFHERTKHIES 1261 Query: 219 DCHFVRDYVTSGFIKIYHIRTFLQLA 296 DCH VR+ + G ++YHI T LQ+A Sbjct: 1262 DCHSVRERLLKGLFELYHINTELQIA 1287 >dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] Length = 509 Score = 100 bits (248), Expect = 2e-19 Identities = 44/85 (51%), Positives = 62/85 (72%) Frame = +3 Query: 42 EAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKID 221 EAEYRS++ T EL+WL +L+DL V++ + L+CDN +A +IA N +F ERTKH++ID Sbjct: 388 EAEYRSMAVATKELLWLAQMLKDLHVEMEFQVKLFCDNKSAMHIANNSVFHERTKHVEID 447 Query: 222 CHFVRDYVTSGFIKIYHIRTFLQLA 296 CH RD V +GF+K+ H+ T QLA Sbjct: 448 CHTTRDRVKNGFLKVLHVDTENQLA 472 >gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica] Length = 1249 Score = 99.4 bits (246), Expect = 3e-19 Identities = 48/86 (55%), Positives = 62/86 (72%) Frame = +3 Query: 39 AEAEYRSLSYTTSELIWLEGLLQDLQVKVPTPINLYCDNTAAKYIAENQIFQERTKHLKI 218 AEAEYR+++ TT ELIWL+GLL DL K P+ L+CDN AA YIA N +F ERTKH+++ Sbjct: 1136 AEAEYRAMASTTCELIWLQGLLNDLGFKRTLPMPLFCDNQAAIYIASNPVFHERTKHIEM 1195 Query: 219 DCHFVRDYVTSGFIKIYHIRTFLQLA 296 DCHFVR+ S I+ +R+ QLA Sbjct: 1196 DCHFVREKTQSDVIQHVFVRSTDQLA 1221