BLASTX nr result

ID: Cnidium21_contig00039850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039850
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]        91   1e-16
ref|XP_002312830.1| transcription factor E2F [Populus trichocarp...    89   3e-16
ref|XP_002328241.1| transcription factor E2F [Populus trichocarp...    89   5e-16
emb|CBI28269.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...    88   6e-16

>emb|CAC17702.1| transcription factor (E2F) [Chenopodium rubrum]
          Length = 454

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = +3

Query: 51  EESRGTETEMRVKEGNAICSDAVASHDFASGIMKIVPDVDIDADYWLISEGDISITDMWR 230
           EE+R  ET+M+ +E + ICSDA A  DF SGIMKIVP+VD DADYWL+S+ D+SITDMWR
Sbjct: 350 EENRDDETKMQGQETHRICSDANAQQDFVSGIMKIVPEVDSDADYWLLSDADVSITDMWR 409

Query: 231 TE 236
           T+
Sbjct: 410 TD 411


>ref|XP_002312830.1| transcription factor E2F [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 473

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  SAVTECQVAPMEAEESRGTETEMRVKEGNAICSDAVASHDFASGIMKIVP-DVDIDADYW 188
           S   E     M  EESR  E EM+ ++G+ ICS+   SHDF SGIMKIVP DV+ DADYW
Sbjct: 355 SGFNENAATTMVTEESRAKEFEMQEQDGHRICSEPNTSHDFVSGIMKIVPSDVNSDADYW 414

Query: 189 LISEGDISITDMWRTE 236
           L+S+ D+SITDMWR E
Sbjct: 415 LLSDADVSITDMWRNE 430


>ref|XP_002328241.1| transcription factor E2F [Populus trichocarpa]
           gi|222837756|gb|EEE76121.1| transcription factor E2F
           [Populus trichocarpa]
          Length = 455

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  SAVTECQVAPMEAEESRGTETEMRVKEGNAICSDAVASHDFASGIMKIVP-DVDIDADYW 188
           S   E     M  EESRG E EM+ ++G+ +CS+   +HDF SGIMKIVP DVD DADYW
Sbjct: 336 SGFNENPATTMTMEESRGKEVEMQEQDGHRMCSELNTAHDFVSGIMKIVPSDVDSDADYW 395

Query: 189 LISEGDISITDMWRTE 236
           L+S+  +SITDMWR E
Sbjct: 396 LLSDPGVSITDMWRNE 411


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  SAVTECQVAPMEAEESRGTETEMRVKEGNAICSDAVASHDFASGIMKIVP-DVDIDADYW 188
           S   E   A M  EESRG E E++ ++ + + SD  AS DF SGIMKIVP DVD DADYW
Sbjct: 327 SGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYW 386

Query: 189 LISEGDISITDMWRTE 236
           L+S+ D+SITDMWRTE
Sbjct: 387 LLSDADVSITDMWRTE 402


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +3

Query: 12  SAVTECQVAPMEAEESRGTETEMRVKEGNAICSDAVASHDFASGIMKIVP-DVDIDADYW 188
           S   E   A M  EESRG E E++ ++ + + SD  AS DF SGIMKIVP DVD DADYW
Sbjct: 338 SGYNEDPTAAMVTEESRGKEIEIQGQDAHRMSSDLNASQDFVSGIMKIVPSDVDSDADYW 397

Query: 189 LISEGDISITDMWRTE 236
           L+S+ D+SITDMWRTE
Sbjct: 398 LLSDADVSITDMWRTE 413


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