BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039844
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea ma...   179   3e-43
ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containi...   175   3e-42
dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]    171   7e-41
ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group] g...   168   4e-40

>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  236 bits (603), Expect = 1e-60
 Identities = 111/152 (73%), Positives = 136/152 (89%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKC 182
           NA+IAAYEQN AGA+A+ LFRRMQ   V++DYIT+VSVISACAS+GAL+ G+W+H++ K 
Sbjct: 299 NAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKR 358

Query: 183 KGLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLL 362
           KGLE NVS+T+ALIDMYAKCGNI+LAR+VF+RL  R+VVSWTS+IGACASHG+GEDA+ L
Sbjct: 359 KGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKL 418

Query: 363 FSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
           FS+MK+EG+KPN +TF AV TACRHSG VEEG
Sbjct: 419 FSRMKDEGVKPNSFTFAAVFTACRHSGLVEEG 450



 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/151 (37%), Positives = 92/151 (60%)
 Frame = +3

Query: 6   AIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCK 185
           A+IA Y QN+   + + +FR M   G + + +TLVSV+ ACA +  L++GK +H      
Sbjct: 199 AVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKL 258

Query: 186 GLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLLF 365
           G++ +VS+T+ALI +Y KCGN+  AR +FD +  + +VSW ++I A   +  G +AV LF
Sbjct: 259 GVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLF 318

Query: 366 SKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            +M+ E +  +  T  +V++AC   G +  G
Sbjct: 319 RRMQAEKVDFDYITMVSVISACASLGALNTG 349



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/152 (30%), Positives = 75/152 (49%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKC 182
           N +I  Y       +A+ L+  M   G+  D  T   V+ +CA + AL  GK VH     
Sbjct: 97  NTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVK 156

Query: 183 KGLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLL 362
            G +++V V S+L+ MY++ G       VF  +  R +VSWT++I     + Y ++ + +
Sbjct: 157 HGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGV 216

Query: 363 FSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
           F +M   G +PN  T  +VL AC    F+  G
Sbjct: 217 FREMVGSGTQPNAVTLVSVLPACAGLEFLNLG 248


>ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
           gi|238005588|gb|ACR33829.1| unknown [Zea mays]
           gi|413920755|gb|AFW60687.1| hypothetical protein
           ZEAMMB73_143396 [Zea mays]
          Length = 569

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/152 (57%), Positives = 113/152 (74%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKC 182
           N ++A YEQ+    +AI  FRRM T  V +D +TLVSV+SACA  GAL  GKWVH++A+ 
Sbjct: 293 NTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARN 352

Query: 183 KGLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLL 362
            GL+T+  + + L+DMYAKCG I  AR+VFD LR R+VVSW+++I A A+HG  E+A+ L
Sbjct: 353 HGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKL 412

Query: 363 FSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
           FS MK EG++PN +TFTAVL AC HSG VEEG
Sbjct: 413 FSLMKNEGVRPNSFTFTAVLVACGHSGLVEEG 444



 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 48/151 (31%), Positives = 81/151 (53%)
 Frame = +3

Query: 6   AIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCK 185
           +++A Y QN    +A+ LF  M   GV  + ITL+S +        LD G+ VH      
Sbjct: 193 SMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRL 252

Query: 186 GLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLLF 365
           G + N+ + +ALI MY KCG+I +A+ +F+ +  R++ SW +++     H    +A+  F
Sbjct: 253 GFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFF 312

Query: 366 SKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            +M  E +  +  T  +VL+AC  SG ++ G
Sbjct: 313 RRMLTEKVGFDCVTLVSVLSACARSGALQTG 343



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 2/149 (1%)
 Frame = +3

Query: 18  AYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCKGLET 197
           ++ Q    AD + L++RM+  GV  D+ T   V+ ACA+   L +G+ VH       L  
Sbjct: 94  SHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRFALAG 153

Query: 198 NVSVTSALIDMYAKCGNINLARDVFDRLR--YRTVVSWTSIIGACASHGYGEDAVLLFSK 371
           +  V SALI MY + G +  A  VF       RTVVSWTS++     + Y  +AV LF  
Sbjct: 154 DGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVALFGT 213

Query: 372 MKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
           M  EG+ PN  T  + L   +   +++ G
Sbjct: 214 MIAEGVLPNEITLISFLPCLQGQEWLDAG 242


>ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Brachypodium distachyon]
          Length = 710

 Score =  175 bits (444), Expect = 3e-42
 Identities = 85/152 (55%), Positives = 110/152 (72%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKC 182
           N ++A YEQN  G  AI  FRRM T  V +D +TLVSV+SACA  GAL+ GKWVH++A+ 
Sbjct: 424 NTMVAMYEQNSDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALETGKWVHELARS 483

Query: 183 KGLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLL 362
            GL+ +  + + L+DMYAKCG I  AR+VFD LR   VVSW+++I A A+HG  ++A+ L
Sbjct: 484 HGLDNDARIGNVLVDMYAKCGEIAYAREVFDSLREPGVVSWSAMISAYANHGEHQEALKL 543

Query: 363 FSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
           FS MK EG+KPN +T TAVL AC HSG V+EG
Sbjct: 544 FSLMKGEGVKPNSFTVTAVLVACGHSGLVDEG 575



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/151 (33%), Positives = 80/151 (52%)
 Frame = +3

Query: 6   AIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCK 185
           A++A Y QN    +AI +F  +   GV  + ITL+S +        L  G+ VH  A   
Sbjct: 324 AMVAGYVQNCFFGEAIAVFGAVVAEGVLPNEITLISFLPCLQGQEWLTAGEMVHGFALKL 383

Query: 186 GLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLLF 365
             + NV + +AL+ MY KCG++  A+ +FD +  RT+VSW +++     +  G  A+  F
Sbjct: 384 RFDANVPLLNALVAMYGKCGSVLSAKGLFDGMATRTLVSWNTMVAMYEQNSDGVQAIKFF 443

Query: 366 SKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            +M  E +  +  T  +VL+AC  SG +E G
Sbjct: 444 RRMLTEKVGFDCVTLVSVLSACARSGALETG 474



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
 Frame = +3

Query: 12  IAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCKGL 191
           + A+   +  + A+ L++RM+  GV  D+ T   V+ ACA+  A  +G+  H  A    L
Sbjct: 223 VHAHSHAEPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFAL 282

Query: 192 ETNVSVTSALIDMYAKCGNINLARDVF--DRLRYRTVVSWTSIIGACASHGYGEDAVLLF 365
             +  V SALI MY + G++  A  VF       RTVVSWT+++     + +  +A+ +F
Sbjct: 283 AGDCFVHSALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNCFFGEAIAVF 342

Query: 366 SKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
             +  EG+ PN  T  + L   +   ++  G
Sbjct: 343 GAVVAEGVLPNEITLISFLPCLQGQEWLTAG 373


>dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 584

 Score =  171 bits (432), Expect = 7e-41
 Identities = 82/152 (53%), Positives = 109/152 (71%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKC 182
           N ++A YEQN  G  AI  F RM +  V +D +TLVSV+SAC   GAL+ GKWVH++A+ 
Sbjct: 299 NTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARS 358

Query: 183 KGLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLL 362
           +GL+T+  + + L+DMYAKCG I  AR  FD LR   VVSW+++I A A+HG  E+A+ L
Sbjct: 359 RGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSWSAMISAYANHGEPEEALNL 418

Query: 363 FSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
           FS MK++G+KPN +T TAVL AC HSG V+EG
Sbjct: 419 FSAMKDQGVKPNSFTLTAVLVACGHSGLVDEG 450



 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/151 (33%), Positives = 79/151 (52%)
 Frame = +3

Query: 6   AIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCK 185
           A++A Y QN     A+ +F  M   G+  + ITL+S +        L  G+ VH      
Sbjct: 199 AMVAGYAQNCLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKL 258

Query: 186 GLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLLF 365
           G + N+ + +ALI MY KCG+I  A+++FD +   TVVSW +++     +G G  A+  F
Sbjct: 259 GFDANLPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFF 318

Query: 366 SKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            +M  E +  +  T  +VL+AC   G +E G
Sbjct: 319 HRMLSEKVGFDAVTLVSVLSACTRQGALETG 349



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
 Frame = +3

Query: 18  AYEQNKAGADA---IMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCKG 188
           A+ Q  AG+ A   + L++RM+  GV  D  T   V+ ACA+  A  +G+  H  A    
Sbjct: 96  AHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFA 155

Query: 189 LETNVSVTSALIDMYAKCGNINLARDVF---DRLRYRTVVSWTSIIGACASHGYGEDAVL 359
           L  +  V SALI MY + G++  A  VF     +  RTVVSWT+++   A +     AV 
Sbjct: 156 LAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVT 215

Query: 360 LFSKMKEEGIKPNIYTFTAVL 422
           +F  M  +G+ PN  T  + L
Sbjct: 216 VFGAMVAQGMLPNEITLISFL 236


>ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
           gi|62734753|gb|AAX96862.1| Similar to selenium-binding
           protein [Oryza sativa Japonica Group]
           gi|77549625|gb|ABA92422.1| pentatricopeptide, putative
           [Oryza sativa Japonica Group]
           gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa
           Japonica Group] gi|125597201|gb|EAZ36981.1| hypothetical
           protein OsJ_21321 [Oryza sativa Japonica Group]
          Length = 582

 Score =  168 bits (426), Expect = 4e-40
 Identities = 83/154 (53%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKC 182
           N ++A YEQ+  G  AI  FRRM T  V +D +TLVSV+SACA  GAL  GKWVH++A+ 
Sbjct: 295 NTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARS 354

Query: 183 KGLETNVSVTSALIDMYAKCGNINLARDVFDR--LRYRTVVSWTSIIGACASHGYGEDAV 356
            GL+T+  + + L+DMYAKCG I  A++VF    LR  +VVSW+++I A A+HG  E+A+
Sbjct: 355 HGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEAL 414

Query: 357 LLFSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            LFS M+ EG++PN +TFTAVL AC HSG V+EG
Sbjct: 415 KLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDEG 448



 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 52/151 (34%), Positives = 81/151 (53%)
 Frame = +3

Query: 6   AIIAAYEQNKAGADAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAKCK 185
           A++A Y QN    +A+ LF  M   GV  + ITL+S +        L +G+ VH      
Sbjct: 195 AMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKL 254

Query: 186 GLETNVSVTSALIDMYAKCGNINLARDVFDRLRYRTVVSWTSIIGACASHGYGEDAVLLF 365
           G + NV + +ALI MY +CG+  +AR +F+ +  RT+VSW +++     HG G  A+  F
Sbjct: 255 GFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFF 314

Query: 366 SKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            +M  E +  +  T  +VL+AC  SG +  G
Sbjct: 315 RRMLTEKVGFDCVTLVSVLSACARSGALGTG 345



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3   NAIIAAYEQNKAGA-DAIMLFRRMQTVGVEYDYITLVSVISACASIGALDIGKWVHDIAK 179
           N ++ A+  ++A A DA+ L+ RM+  GV  D+ T   V+ ACA+  A  +G+  H  A 
Sbjct: 91  NTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAV 150

Query: 180 CKGLETNVSVTSALIDMYAKCGNINLARDVF-DRLRYRTVVSWTSIIGACASHGYGEDAV 356
              L  +  V+SALI MY++ G +  A  VF +R   RTVVSWT+++   A + +  +AV
Sbjct: 151 RFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAV 210

Query: 357 LLFSKMKEEGIKPNIYTFTAVLTACRHSGFVEEG 458
            LFS M   G+ PN  T  + L   R   ++  G
Sbjct: 211 TLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVG 244