BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039835
         (959 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...   434   e-119
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...   420   e-115
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   418   e-115
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...   418   e-115
ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containi...   415   e-114

>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score =  434 bits (1116), Expect = e-119
 Identities = 211/307 (68%), Positives = 247/307 (80%)
 Frame = +1

Query: 37  PPQNPQPLPIVNPNPKPKTRTPLEKQFETWLDKLKPGFTPLDVQQALKAQSDPDLALDIF 216
           PPQN   L +  P PK +T+TPLEKQFE+W+ KLKPGF+P DV +AL+AQSDPDLALD+F
Sbjct: 52  PPQNSDNLNL--PIPKVRTQTPLEKQFESWVQKLKPGFSPSDVNEALQAQSDPDLALDLF 109

Query: 217 RWTAQQRRYKHTADTYLTMLHISVYARRYRQAETLVEEVIAGACPGSVELYNSVIKFCCG 396
           RWTAQQR YKH   TYLT++ I +Y RR   AETLVEEVIAGAC  SV LYNSVI+FCC 
Sbjct: 110 RWTAQQRGYKHNHLTYLTIIKILIYRRRCHLAETLVEEVIAGACEMSVPLYNSVIRFCCA 169

Query: 397 RKFLFNRAFDVYKKMWRSEDAKPSLETYXXXXXXXXXXXXXXXVSYGYLHSVRSMNKQMK 576
           RK  FNRAFDVYKKMW+S+D KP+LETY               VSY YLHSVRS+ KQMK
Sbjct: 170 RKCRFNRAFDVYKKMWKSDDCKPTLETYAMLFNSLLRRFNKLSVSYVYLHSVRSLTKQMK 229

Query: 577 ALGIIPDTFVLNLMIKAFAKCLQVDEAIRVFREMGLYGCEPNLYTYSYLIKGLCEKGRVS 756
           + G+IPDTFVLN++IKA++KCL+VDEAIRVFREMGLY C+PN YTY Y+ KGLCEKGRV 
Sbjct: 230 SSGVIPDTFVLNMIIKAYSKCLEVDEAIRVFREMGLYACQPNSYTYGYIAKGLCEKGRVE 289

Query: 757 QGLEFFWEMREKGLVPKGSSYMILICSLAMEQKFDVAIDIVFDMLSNSLPPDFLTYKTLL 936
           QGLEF+ EMR +GL+P  S+YMILICSLAME++F+ AI+I FDML NS+ PD LTY+TLL
Sbjct: 290 QGLEFYKEMRVRGLIPSSSTYMILICSLAMERRFEEAIEICFDMLCNSMAPDLLTYRTLL 349

Query: 937 EGLCREG 957
           EGLCREG
Sbjct: 350 EGLCREG 356


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score =  420 bits (1080), Expect = e-115
 Identities = 206/315 (65%), Positives = 245/315 (77%)
 Frame = +1

Query: 13  TTIRHHSSPPQNPQPLPIVNPNPKPKTRTPLEKQFETWLDKLKPGFTPLDVQQALKAQSD 192
           +T    SSP +N   LPI  P  + +TRTPLE QFETW   LKPGFTP DVQ AL++QSD
Sbjct: 34  STFSTQSSPTENTD-LPI--PPVRTRTRTPLETQFETWTQTLKPGFTPTDVQTALRSQSD 90

Query: 193 PDLALDIFRWTAQQRRYKHTADTYLTMLHISVYARRYRQAETLVEEVIAGACPGSVELYN 372
           PDLA DIFRWTAQQR YKH+  TY  M+ I +  +RYR AETLVEEVIAGAC  +V+LYN
Sbjct: 91  PDLAYDIFRWTAQQRNYKHSHLTYFAMIKILIDGKRYRHAETLVEEVIAGACEMNVQLYN 150

Query: 373 SVIKFCCGRKFLFNRAFDVYKKMWRSEDAKPSLETYXXXXXXXXXXXXXXXVSYGYLHSV 552
           S+I+FCCGRK LFNRAFDVYKKM +S+D KP+LETY               V Y YLH+V
Sbjct: 151 SMIRFCCGRKLLFNRAFDVYKKMLQSDDCKPTLETYTLLLNSLLRRFNKLNVCYVYLHAV 210

Query: 553 RSMNKQMKALGIIPDTFVLNLMIKAFAKCLQVDEAIRVFREMGLYGCEPNLYTYSYLIKG 732
           +S+ KQMKA G+IPDTF LN++IKAFAKC +VDEAIRVFREMGLYGCEPN Y+Y Y++KG
Sbjct: 211 KSLTKQMKASGVIPDTFALNMIIKAFAKCREVDEAIRVFREMGLYGCEPNGYSYGYIVKG 270

Query: 733 LCEKGRVSQGLEFFWEMREKGLVPKGSSYMILICSLAMEQKFDVAIDIVFDMLSNSLPPD 912
           LCEKGRV QGL F+ EM+ K L+P G +YMILICSLA++ +   AID+VFDML+NS+ PD
Sbjct: 271 LCEKGRVGQGLGFYKEMKRKELIPSGGTYMILICSLAVDLRLGEAIDVVFDMLANSMSPD 330

Query: 913 FLTYKTLLEGLCREG 957
           FLTY+T+LEGLCREG
Sbjct: 331 FLTYRTVLEGLCREG 345


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  418 bits (1075), Expect = e-115
 Identities = 203/304 (66%), Positives = 238/304 (78%)
 Frame = +1

Query: 46  NPQPLPIVNPNPKPKTRTPLEKQFETWLDKLKPGFTPLDVQQALKAQSDPDLALDIFRWT 225
           +P+ L     +P PKT TPL+ QFE+W+  LKPGF+P DV +AL+AQSDPDLALDIFRWT
Sbjct: 53  DPETLIPPPQSPNPKTPTPLQMQFESWIHMLKPGFSPSDVDEALRAQSDPDLALDIFRWT 112

Query: 226 AQQRRYKHTADTYLTMLHISVYARRYRQAETLVEEVIAGACPGSVELYNSVIKFCCGRKF 405
            QQR Y+H   TYLTM+ I+V  +R+R AETL+EEVIAGAC  SV LYNS+I+FCCGRKF
Sbjct: 113 GQQRGYRHNHVTYLTMIKIAVSGKRFRHAETLIEEVIAGACSVSVPLYNSIIRFCCGRKF 172

Query: 406 LFNRAFDVYKKMWRSEDAKPSLETYXXXXXXXXXXXXXXXVSYGYLHSVRSMNKQMKALG 585
           LFNRAFDVYKKM  SED KPSLETY               V Y YLH+VRS+ KQMK  G
Sbjct: 173 LFNRAFDVYKKMLNSEDCKPSLETYTLLLNALLRKFNKLTVCYVYLHAVRSLTKQMKVSG 232

Query: 586 IIPDTFVLNLMIKAFAKCLQVDEAIRVFREMGLYGCEPNLYTYSYLIKGLCEKGRVSQGL 765
           +IPDTF LN++IKA++KCL+VDEAIRVFREMGLYGCEPN YTY Y+  GLCEKGRVSQGL
Sbjct: 233 VIPDTFALNMIIKAYSKCLEVDEAIRVFREMGLYGCEPNAYTYGYIANGLCEKGRVSQGL 292

Query: 766 EFFWEMREKGLVPKGSSYMILICSLAMEQKFDVAIDIVFDMLSNSLPPDFLTYKTLLEGL 945
            F+ EMR K LVP  S+Y+ILICSL+ME++F+ A  I+FDML NS+ PD LTYKTLLEGL
Sbjct: 293 GFYREMRSKDLVPSSSTYVILICSLSMERRFEEATKILFDMLGNSMAPDLLTYKTLLEGL 352

Query: 946 CREG 957
            REG
Sbjct: 353 SREG 356


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  418 bits (1075), Expect = e-115
 Identities = 200/289 (69%), Positives = 234/289 (80%)
 Frame = +1

Query: 91  TRTPLEKQFETWLDKLKPGFTPLDVQQALKAQSDPDLALDIFRWTAQQRRYKHTADTYLT 270
           TRTPLE QFETW   LKPGFTP DV  A++AQSDPDLALDIFRWTAQQR YKH   TYLT
Sbjct: 1   TRTPLETQFETWTQNLKPGFTPTDVDTAIRAQSDPDLALDIFRWTAQQRNYKHNHITYLT 60

Query: 271 MLHISVYARRYRQAETLVEEVIAGACPGSVELYNSVIKFCCGRKFLFNRAFDVYKKMWRS 450
           ++ I +  RRYRQAETL+EEVIAGAC  SV LYNS+I+FCCGRK LFNRAFD+YKKM +S
Sbjct: 61  VIKILISGRRYRQAETLIEEVIAGACEISVPLYNSMIRFCCGRKLLFNRAFDIYKKMLKS 120

Query: 451 EDAKPSLETYXXXXXXXXXXXXXXXVSYGYLHSVRSMNKQMKALGIIPDTFVLNLMIKAF 630
           ED KP+L+TY               V Y YLH+V+S+ KQMKA G+IPDTFVLN++IKA+
Sbjct: 121 EDCKPTLDTYTLLFNSLLRRFNKLNVCYVYLHAVKSLTKQMKASGVIPDTFVLNMIIKAY 180

Query: 631 AKCLQVDEAIRVFREMGLYGCEPNLYTYSYLIKGLCEKGRVSQGLEFFWEMREKGLVPKG 810
           AKCL+VDEA+RVFREMGLYGCE N Y+YSYL+KGLC KGR  QGL F+ EM+ KGLVP G
Sbjct: 181 AKCLEVDEAVRVFREMGLYGCEANAYSYSYLVKGLCGKGRSGQGLGFYKEMKGKGLVPSG 240

Query: 811 SSYMILICSLAMEQKFDVAIDIVFDMLSNSLPPDFLTYKTLLEGLCREG 957
           S+YMILICSL ME++F+ AI +VFDML +S+ PD LTY+T+LEGLCREG
Sbjct: 241 STYMILICSLGMERRFEEAIGVVFDMLGDSMSPDLLTYRTVLEGLCREG 289


>ref|XP_003546072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Glycine max]
          Length = 372

 Score =  415 bits (1066), Expect = e-114
 Identities = 208/328 (63%), Positives = 247/328 (75%), Gaps = 9/328 (2%)
 Frame = +1

Query: 1   LLSFTTIRHHSSPP-QNPQP-LPIVN------PNPKPKTRTPLEKQFETWLDKLKPGFTP 156
           L S  ++  +S  P   PQP LP+        P+    +RTP EKQFETW+  LKPGFTP
Sbjct: 8   LFSLRSVSTYSLTPFTRPQPSLPLTRLLLHARPSSTSPSRTPSEKQFETWVQALKPGFTP 67

Query: 157 LDVQQALKAQSDPDLALDIFRWTAQQRRYKHTADTYLTMLHISVYARRYRQAETLVEEVI 336
            DV QAL+AQSDPDLALDIFRWTAQQR YKHT  TYL ++   +  RRY  AETL+EEVI
Sbjct: 68  SDVAQALQAQSDPDLALDIFRWTAQQRNYKHTHHTYLIIIKHLIAGRRYHHAETLIEEVI 127

Query: 337 AGACP-GSVELYNSVIKFCCGRKFLFNRAFDVYKKMWRSEDAKPSLETYXXXXXXXXXXX 513
           AGAC   S+ LYNS+I+FCCGRKFLFNRAFDVYKKM  S D KP+LETY           
Sbjct: 128 AGACDDASIPLYNSIIRFCCGRKFLFNRAFDVYKKMLNSRDCKPNLETYSLLFNSLLRRF 187

Query: 514 XXXXVSYGYLHSVRSMNKQMKALGIIPDTFVLNLMIKAFAKCLQVDEAIRVFREMGLYGC 693
               V Y YLH+VRS+ KQMKA G+IPD+FVLN++IKA+AKCL+VDEAIRVFREMGLYGC
Sbjct: 188 NKLNVCYVYLHAVRSLTKQMKASGVIPDSFVLNMIIKAYAKCLEVDEAIRVFREMGLYGC 247

Query: 694 EPNLYTYSYLIKGLCEKGRVSQGLEFFWEMREKGLVPKGSSYMILICSLAMEQKFDVAID 873
           EPN Y+Y Y+ KGLCEKGRV QGL F+ EMR KGLVP  S+++I++CSLAME++F+ AI+
Sbjct: 248 EPNAYSYGYIAKGLCEKGRVDQGLRFYREMRGKGLVPSTSTFVIIVCSLAMERRFEDAIE 307

Query: 874 IVFDMLSNSLPPDFLTYKTLLEGLCREG 957
           ++FDML  S  PD LTYKT+LEGLCREG
Sbjct: 308 VLFDMLGQSRSPDHLTYKTVLEGLCREG 335