BLASTX nr result

ID: Cnidium21_contig00039832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039832
         (874 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279813.1| PREDICTED: probable polygalacturonase non-ca...   378   e-102
ref|XP_002511417.1| Polygalacturonase-1 non-catalytic subunit be...   367   1e-99
ref|XP_002318036.1| predicted protein [Populus trichocarpa] gi|2...   366   3e-99
ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit be...   363   3e-98
ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2...   361   1e-97

>ref|XP_002279813.1| PREDICTED: probable polygalacturonase non-catalytic subunit
            JP650-like [Vitis vinifera]
          Length = 630

 Score =  378 bits (970), Expect = e-102
 Identities = 186/258 (72%), Positives = 212/258 (82%), Gaps = 5/258 (1%)
 Frame = +1

Query: 4    TFKDYARKGVTFSQYTKPSSSTNAF-----GKSENKRGFSGKFFREYMLREGKVMRMPDI 168
            TFKDY RKGVTFSQY++ SS+T A      G S N+    GKFFRE ML+EG VM MPDI
Sbjct: 373  TFKDYERKGVTFSQYSRASSNTTATATTASGISVNRWVEPGKFFRESMLKEGNVMVMPDI 432

Query: 169  RDKMPVRSFLPRVISSKLPFSSDGLTELKQVFGATDNSSMEGVLVTALAECERASSPGET 348
            RD+MP RSFLPRVI+SKLPFSS  L ELK +F A DNS+ME V+  AL ECERA S GET
Sbjct: 433  RDRMPERSFLPRVIASKLPFSSSRLQELKDIFHARDNSTMEHVIANALEECERAPSRGET 492

Query: 349  KRCVGSVEDMIDFAISVLGHNVVVRTTKNVNGSKKNVMIGKIKAVNGGKATISVSCHQSL 528
            KRCVGSVEDMIDFA+SVLGH+VVVRTT+   GSK+ VM+G+++ +NGGK T SVSCHQSL
Sbjct: 493  KRCVGSVEDMIDFAVSVLGHDVVVRTTETTRGSKQRVMVGEVRGINGGKVTRSVSCHQSL 552

Query: 529  YPYLLYYCHSVPKVRVYMADILDVDTKAKINEGLAICHEDTSAWSPGHGAFVALGSSPGN 708
            YPYLLYYCHSVPKVRVY  DILDV+ K K+N+G+AICH DTSAWS  HGAFVALGSSPG 
Sbjct: 553  YPYLLYYCHSVPKVRVYEVDILDVERKEKMNKGVAICHIDTSAWSQSHGAFVALGSSPGL 612

Query: 709  IEICHWIFENDMSWTTAD 762
            IE+CHWIFENDM+WTT+D
Sbjct: 613  IEVCHWIFENDMTWTTSD 630


>ref|XP_002511417.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
            [Ricinus communis] gi|223550532|gb|EEF52019.1|
            Polygalacturonase-1 non-catalytic subunit beta precursor,
            putative [Ricinus communis]
          Length = 637

 Score =  367 bits (943), Expect = 1e-99
 Identities = 181/254 (71%), Positives = 212/254 (83%), Gaps = 1/254 (0%)
 Frame = +1

Query: 4    TFKDYARKGVTFSQYTKPSSSTNAFGKSENKRGFS-GKFFREYMLREGKVMRMPDIRDKM 180
            +FK+Y +KGVTF+ Y   +S++ +F    N+R    GKFFRE ML++G V+ MPDI DKM
Sbjct: 387  SFKEYIQKGVTFAAYANTTSTSGSF---VNRRWVEPGKFFRESMLKQGNVVVMPDITDKM 443

Query: 181  PVRSFLPRVISSKLPFSSDGLTELKQVFGATDNSSMEGVLVTALAECERASSPGETKRCV 360
            P RSFLPR I SKLPFSS  L+ELK+VF A +NS+ME VLV ALAECER  S GETKRCV
Sbjct: 444  PKRSFLPRSIVSKLPFSSPRLSELKEVFHALENSTMECVLVNALAECEREPSQGETKRCV 503

Query: 361  GSVEDMIDFAISVLGHNVVVRTTKNVNGSKKNVMIGKIKAVNGGKATISVSCHQSLYPYL 540
            GSVEDMI+FA+SVLGHNVVVRTT+NV+GS KNVMIG++K +NGG+ T SVSCHQSLYPYL
Sbjct: 504  GSVEDMIEFAVSVLGHNVVVRTTENVHGSSKNVMIGRVKGINGGEVTKSVSCHQSLYPYL 563

Query: 541  LYYCHSVPKVRVYMADILDVDTKAKINEGLAICHEDTSAWSPGHGAFVALGSSPGNIEIC 720
            LYYCHSVP+VRVY A+ILDV++K +IN G+AICH DTSAWSP HGAFVAL SSPG IE+C
Sbjct: 564  LYYCHSVPRVRVYEAEILDVESKERINLGVAICHIDTSAWSPNHGAFVALESSPGQIEVC 623

Query: 721  HWIFENDMSWTTAD 762
            HWIFENDMSWT AD
Sbjct: 624  HWIFENDMSWTVAD 637


>ref|XP_002318036.1| predicted protein [Populus trichocarpa] gi|222858709|gb|EEE96256.1|
            predicted protein [Populus trichocarpa]
          Length = 615

 Score =  366 bits (940), Expect = 3e-99
 Identities = 181/254 (71%), Positives = 206/254 (81%), Gaps = 1/254 (0%)
 Frame = +1

Query: 4    TFKDYARKGVTFSQYTKPSSSTNAFGKSENKRGFS-GKFFREYMLREGKVMRMPDIRDKM 180
            +F  Y  KGVTF+ Y+  SS  +  G S NKR    GKFFRE ML+ G VM MPDIRDKM
Sbjct: 360  SFMVYKDKGVTFAGYSNTSSMPSDNGVSVNKRRVEPGKFFRESMLKPGNVMVMPDIRDKM 419

Query: 181  PVRSFLPRVISSKLPFSSDGLTELKQVFGATDNSSMEGVLVTALAECERASSPGETKRCV 360
            P RSFLPR I SKLPFS+  + +LK +F A+DNS+M  VL+ ALAECERA S GETKRCV
Sbjct: 420  PERSFLPRSIVSKLPFSTTKMAKLKDLFHASDNSTMTRVLINALAECERAPSHGETKRCV 479

Query: 361  GSVEDMIDFAISVLGHNVVVRTTKNVNGSKKNVMIGKIKAVNGGKATISVSCHQSLYPYL 540
            GSVEDMIDFA+SVLGHNV VRTT+NVNGSKK VMIG ++ +NGG+ T SVSCHQSLYPYL
Sbjct: 480  GSVEDMIDFAVSVLGHNVTVRTTENVNGSKKRVMIGSVEGINGGQVTKSVSCHQSLYPYL 539

Query: 541  LYYCHSVPKVRVYMADILDVDTKAKINEGLAICHEDTSAWSPGHGAFVALGSSPGNIEIC 720
            LYYCHSVP+VRVY ADI+DV++K KIN G+AICH DTSAW P HGAFVALGSSPG IE+C
Sbjct: 540  LYYCHSVPRVRVYEADIVDVESKEKINVGVAICHVDTSAWGPEHGAFVALGSSPGKIEVC 599

Query: 721  HWIFENDMSWTTAD 762
            HWIFENDM+WT AD
Sbjct: 600  HWIFENDMTWTIAD 613


>ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
            [Ricinus communis] gi|223535346|gb|EEF37021.1|
            Polygalacturonase-1 non-catalytic subunit beta precursor,
            putative [Ricinus communis]
          Length = 631

 Score =  363 bits (932), Expect = 3e-98
 Identities = 178/260 (68%), Positives = 206/260 (79%), Gaps = 7/260 (2%)
 Frame = +1

Query: 4    TFKDYARKGVTFSQYTK----PSSSTNAF---GKSENKRGFSGKFFREYMLREGKVMRMP 162
            TFK+YA+ GV+F++YT     PS+ T A    G   N+    GKFFRE  L++G VM MP
Sbjct: 372  TFKEYAKLGVSFAKYTNITATPSAETTAMKASGSLVNRWVEPGKFFRESKLKKGTVMPMP 431

Query: 163  DIRDKMPVRSFLPRVISSKLPFSSDGLTELKQVFGATDNSSMEGVLVTALAECERASSPG 342
            DIRDKMP RSFLPR I+SKLPFS+    +LKQ F A DNS+ME +++ AL ECERA SPG
Sbjct: 432  DIRDKMPKRSFLPRSITSKLPFSTSNFAQLKQTFHAFDNSTMETLMLDALTECERAPSPG 491

Query: 343  ETKRCVGSVEDMIDFAISVLGHNVVVRTTKNVNGSKKNVMIGKIKAVNGGKATISVSCHQ 522
            ETKRC+GS ED+IDFA SVLG NVV RTT NVNGSKKN+ IG IK +NGGK T SVSCHQ
Sbjct: 492  ETKRCIGSAEDLIDFATSVLGRNVVARTTANVNGSKKNIKIGSIKGINGGKVTESVSCHQ 551

Query: 523  SLYPYLLYYCHSVPKVRVYMADILDVDTKAKINEGLAICHEDTSAWSPGHGAFVALGSSP 702
            SLYPYLLYYCHSVPKVRVY ADILD ++ +KIN G+AICH DTS+WSP HGAFVALGS P
Sbjct: 552  SLYPYLLYYCHSVPKVRVYEADILDPNSNSKINHGVAICHLDTSSWSPTHGAFVALGSGP 611

Query: 703  GNIEICHWIFENDMSWTTAD 762
            G IE+CHWIFEND++WTTAD
Sbjct: 612  GRIEVCHWIFENDLTWTTAD 631


>ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1|
            predicted protein [Populus trichocarpa]
          Length = 598

 Score =  361 bits (926), Expect = 1e-97
 Identities = 177/261 (67%), Positives = 209/261 (80%), Gaps = 7/261 (2%)
 Frame = +1

Query: 1    TTFKDYA-RKGVTFSQYTKPSSS-----TNAFGKSENKRGFS-GKFFREYMLREGKVMRM 159
            TTFKDYA +KGVTF+ YT  S++      N+    +N +    GKFFRE ML++G VM M
Sbjct: 338  TTFKDYANKKGVTFAGYTSASTADASMKVNSDSVVKNNKWIEPGKFFRESMLKKGSVMPM 397

Query: 160  PDIRDKMPVRSFLPRVISSKLPFSSDGLTELKQVFGATDNSSMEGVLVTALAECERASSP 339
            PDIRDKMP RSFLPR I SKLPFS+  + +LK++F A+DNSSME +++ AL ECER+ SP
Sbjct: 398  PDIRDKMPKRSFLPRSIISKLPFSTSKIDQLKEIFHASDNSSMERIILDALEECERSPSP 457

Query: 340  GETKRCVGSVEDMIDFAISVLGHNVVVRTTKNVNGSKKNVMIGKIKAVNGGKATISVSCH 519
            GETKRC GS EDMIDFA SVLG NV VRTT NVNGSKKN+MIG IK +NGG+ T SVSCH
Sbjct: 458  GETKRCAGSAEDMIDFATSVLGRNVAVRTTDNVNGSKKNIMIGSIKGINGGRVTRSVSCH 517

Query: 520  QSLYPYLLYYCHSVPKVRVYMADILDVDTKAKINEGLAICHEDTSAWSPGHGAFVALGSS 699
            Q+LYPYLLYYCHSVPKVRVY AD+LD ++KA IN G+AICH DTS+WSP HGAF+ALGS 
Sbjct: 518  QTLYPYLLYYCHSVPKVRVYEADLLDPNSKATINHGVAICHLDTSSWSPTHGAFLALGSG 577

Query: 700  PGNIEICHWIFENDMSWTTAD 762
            PG IE+CHWIFENDM+WT A+
Sbjct: 578  PGRIEVCHWIFENDMTWTIAE 598


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