BLASTX nr result

ID: Cnidium21_contig00039817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039817
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310916.1| precursor of transferase serine hydroxymethy...    90   2e-16
gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Po...    90   2e-16
gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]       90   2e-16
ref|XP_002527346.1| serine hydroxymethyltransferase, putative [R...    89   3e-16
ref|XP_002315363.1| precursor of transferase serine hydroxymethy...    89   3e-16

>ref|XP_002310916.1| precursor of transferase serine hydroxymethyltransferase 2 [Populus
           trichocarpa] gi|222850736|gb|EEE88283.1| precursor of
           transferase serine hydroxymethyltransferase 2 [Populus
           trichocarpa]
          Length = 518

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/92 (57%), Positives = 60/92 (65%)
 Frame = -3

Query: 355 EKVLESVAIAANKNTVPGDVSAMVPVCMRD*FRNSGTPALTSRGFVEEDFFKVAEFFDXX 176
           EKVLESV IAANKNTVPGDVSAMVP  +R      GTPALTSRGFVEEDF KVA+FFD  
Sbjct: 404 EKVLESVHIAANKNTVPGDVSAMVPGGIR-----MGTPALTSRGFVEEDFAKVADFFDAS 458

Query: 175 XXXXXXXXADTKGRSEFTNLSVLGETHFIADV 80
                   A+TKG      L  +   HF +++
Sbjct: 459 VKLAVKMKAETKGTKLKDFLVTMQSAHFQSEI 490


>gb|ABO61377.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
          Length = 520

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/92 (57%), Positives = 60/92 (65%)
 Frame = -3

Query: 355 EKVLESVAIAANKNTVPGDVSAMVPVCMRD*FRNSGTPALTSRGFVEEDFFKVAEFFDXX 176
           EKVLESV IAANKNTVPGDVSAMVP  +R      GTPALTSRGFVEEDF KVA+FFD  
Sbjct: 406 EKVLESVHIAANKNTVPGDVSAMVPGGIR-----MGTPALTSRGFVEEDFAKVADFFDAS 460

Query: 175 XXXXXXXXADTKGRSEFTNLSVLGETHFIADV 80
                   A+TKG      L  +   HF +++
Sbjct: 461 VKLAVKMKAETKGTKLKDFLVTMQSAHFQSEI 492


>gb|ABK96362.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 520

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/92 (57%), Positives = 60/92 (65%)
 Frame = -3

Query: 355 EKVLESVAIAANKNTVPGDVSAMVPVCMRD*FRNSGTPALTSRGFVEEDFFKVAEFFDXX 176
           EKVLESV IAANKNTVPGDVSAMVP  +R      GTPALTSRGFVEEDF KVA+FFD  
Sbjct: 406 EKVLESVHIAANKNTVPGDVSAMVPGGIR-----MGTPALTSRGFVEEDFAKVADFFDAS 460

Query: 175 XXXXXXXXADTKGRSEFTNLSVLGETHFIADV 80
                   A+TKG      L  +   HF +++
Sbjct: 461 VKLAVKMKAETKGTKLKDFLVTMQSAHFQSEI 492


>ref|XP_002527346.1| serine hydroxymethyltransferase, putative [Ricinus communis]
           gi|223533265|gb|EEF35018.1| serine
           hydroxymethyltransferase, putative [Ricinus communis]
          Length = 513

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 52/73 (71%), Positives = 53/73 (72%)
 Frame = -3

Query: 355 EKVLESVAIAANKNTVPGDVSAMVPVCMRD*FRNSGTPALTSRGFVEEDFFKVAEFFDXX 176
           EKVLESV IAANKNTVPGDVSAMVP  +R      GTPALTSRGFVEEDF KVAEFFD  
Sbjct: 399 EKVLESVHIAANKNTVPGDVSAMVPGGIR-----MGTPALTSRGFVEEDFAKVAEFFDAA 453

Query: 175 XXXXXXXXADTKG 137
                   ADTKG
Sbjct: 454 VKLALKIKADTKG 466


>ref|XP_002315363.1| precursor of transferase serine hydroxymethyltransferase 7 [Populus
           trichocarpa] gi|222864403|gb|EEF01534.1| precursor of
           transferase serine hydroxymethyltransferase 7 [Populus
           trichocarpa]
          Length = 520

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 53/92 (57%), Positives = 60/92 (65%)
 Frame = -3

Query: 355 EKVLESVAIAANKNTVPGDVSAMVPVCMRD*FRNSGTPALTSRGFVEEDFFKVAEFFDXX 176
           EKVLESV IAANKNTVPGDVSAMVP  +R      GTPALTSRGFVEEDF KVA+FFD  
Sbjct: 406 EKVLESVHIAANKNTVPGDVSAMVPGGIR-----MGTPALTSRGFVEEDFAKVADFFDAA 460

Query: 175 XXXXXXXXADTKGRSEFTNLSVLGETHFIADV 80
                   A+TKG      L+     HF +++
Sbjct: 461 VKLAVEIKAETKGTKLKDFLATQSAPHFQSEI 492


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