BLASTX nr result

ID: Cnidium21_contig00039809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039809
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cuc...   144   7e-33
ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40...   140   8e-32
ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabid...   137   9e-31
ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata...   136   2e-30
ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinu...   136   2e-30

>ref|XP_004134751.1| PREDICTED: polyubiquitin-like isoform 3 [Cucumis sativus]
          Length = 344

 Score =  144 bits (363), Expect = 7e-33
 Identities = 65/87 (74%), Positives = 75/87 (86%)
 Frame = -1

Query: 392 SE*AFFYQGSELQLGVEGFVVGFLYTIVGLLLAFLTHFLVKVRSVKAQKLVMIVVLLVSF 213
           S+  FFYQGS +QLG EGF VGFLYTIVGLLLAF+TH LVKVR+V  Q++ MI+ L VSF
Sbjct: 258 SKLVFFYQGSGMQLGAEGFAVGFLYTIVGLLLAFMTHVLVKVRNVNIQRVFMIIALFVSF 317

Query: 212 WAVKKVVFLDNWKTGYGVYAYWPSSWN 132
           WAVKKVV+LDNWKTGYG++ YWPSSWN
Sbjct: 318 WAVKKVVYLDNWKTGYGIHGYWPSSWN 344


>ref|XP_004155670.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-40S ribosomal protein
           S27a-like [Cucumis sativus]
          Length = 228

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/87 (72%), Positives = 74/87 (85%)
 Frame = -1

Query: 392 SE*AFFYQGSELQLGVEGFVVGFLYTIVGLLLAFLTHFLVKVRSVKAQKLVMIVVLLVSF 213
           S+  FFYQGS +QLG EGF VGFLYTIVGLLLAF+TH LVKV++V  Q++  I+ L VSF
Sbjct: 142 SKLVFFYQGSGMQLGAEGFAVGFLYTIVGLLLAFMTHVLVKVKNVNIQRVXRIIALFVSF 201

Query: 212 WAVKKVVFLDNWKTGYGVYAYWPSSWN 132
           WAVKKVV+LDNWKTGYG++ YWPSSWN
Sbjct: 202 WAVKKVVYLDNWKTGYGIHGYWPSSWN 228


>ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabidopsis thaliana]
           gi|75213403|sp|Q9SYB5.1|OST3B_ARATH RecName:
           Full=Probable dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 3B; Flags: Precursor
           gi|4508079|gb|AAD21423.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332195765|gb|AEE33886.1| OST3
           and OST6 domain-containing protein [Arabidopsis
           thaliana]
          Length = 346

 Score =  137 bits (345), Expect = 9e-31
 Identities = 58/82 (70%), Positives = 74/82 (90%)
 Frame = -1

Query: 380 FFYQGSELQLGVEGFVVGFLYTIVGLLLAFLTHFLVKVRSVKAQKLVMIVVLLVSFWAVK 201
           FFYQGS +QLG EGF VGFLYT+VGLLLAF+T+ LV+V+++ AQ+L+M++ L +SFWAVK
Sbjct: 264 FFYQGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNITAQRLIMLLALFISFWAVK 323

Query: 200 KVVFLDNWKTGYGVYAYWPSSW 135
           KVV+LDNWKTGYG++ YWPSSW
Sbjct: 324 KVVYLDNWKTGYGIHPYWPSSW 345


>ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333910|gb|EFH64328.1| OST3/OST6 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  136 bits (343), Expect = 2e-30
 Identities = 58/82 (70%), Positives = 74/82 (90%)
 Frame = -1

Query: 380 FFYQGSELQLGVEGFVVGFLYTIVGLLLAFLTHFLVKVRSVKAQKLVMIVVLLVSFWAVK 201
           FFYQGS +QLG EGF VGFLYT+VGLLLAF+T+ LV+V+++ AQ+L+M++ L +SFWAVK
Sbjct: 264 FFYQGSGMQLGAEGFAVGFLYTVVGLLLAFVTNVLVRVKNLTAQRLIMLLALFISFWAVK 323

Query: 200 KVVFLDNWKTGYGVYAYWPSSW 135
           KVV+LDNWKTGYG++ YWPSSW
Sbjct: 324 KVVYLDNWKTGYGIHPYWPSSW 345


>ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinus communis]
           gi|223542371|gb|EEF43913.1| Tumor suppressor candidate,
           putative [Ricinus communis]
          Length = 349

 Score =  136 bits (342), Expect = 2e-30
 Identities = 58/82 (70%), Positives = 72/82 (87%)
 Frame = -1

Query: 380 FFYQGSELQLGVEGFVVGFLYTIVGLLLAFLTHFLVKVRSVKAQKLVMIVVLLVSFWAVK 201
           FFYQGS +QLG EGF +GFLYT+VGLLLAF+TH LV V++V  Q+ VM+V L++SFWAV 
Sbjct: 267 FFYQGSGMQLGAEGFAIGFLYTVVGLLLAFITHVLVMVKNVTVQRFVMVVSLVISFWAVN 326

Query: 200 KVVFLDNWKTGYGVYAYWPSSW 135
           KV++LDNWKTGYGV+A+WPSSW
Sbjct: 327 KVIYLDNWKTGYGVHAFWPSSW 348


Top