BLASTX nr result

ID: Cnidium21_contig00039802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039802
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like...   186   1e-45
ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like...   183   1e-44
ref|NP_188919.1| leucine-rich repeat extensin-like protein 6 [Ar...   181   6e-44
ref|XP_002885524.1| hypothetical protein ARALYDRAFT_898761 [Arab...   180   1e-43
ref|XP_002862780.1| hypothetical protein ARALYDRAFT_920276 [Arab...   180   1e-43

>ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Vitis
           vinifera]
          Length = 394

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/124 (71%), Positives = 103/124 (83%)
 Frame = +1

Query: 1   DNPSYQTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELD 180
           D+P   TVAGIDLNHADI+G LPE LG L DL LFHINSN F GTLP SF +LRLLYELD
Sbjct: 86  DDPHITTVAGIDLNHADIAGSLPEELGLLTDLALFHINSNRFCGTLPDSFRHLRLLYELD 145

Query: 181 ISNNIFSGEFPQVVFSLPSLKFLDIRFNQFQGDIPSNVFNLKLDALFINNNNFQSKIPEN 360
           ISNN F G+FP VV  LPSLKFLDIR+N+F+GDIP+ +F+LKLDA+F+NNN F+S +P N
Sbjct: 146 ISNNRFKGQFPSVVLCLPSLKFLDIRYNEFEGDIPTGLFDLKLDAIFVNNNKFKSSLPGN 205

Query: 361 IGNS 372
           IGNS
Sbjct: 206 IGNS 209



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/114 (31%), Positives = 69/114 (60%)
 Frame = +1

Query: 16  QTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELDISNNI 195
           +T+  + + +A + G L   +G LK++T+F ++SN   G LP++   ++ L +L++++N 
Sbjct: 234 KTLNELIITNAGLKGCLSPEIGLLKNVTVFDVSSNELVGPLPETIGEMKSLEQLNVAHNK 293

Query: 196 FSGEFPQVVFSLPSLKFLDIRFNQFQGDIPSNVFNLKLDALFINNNNFQSKIPE 357
            SGE P+ + SLP+L+     +N F G+ P+    LKL A    N++ ++ IP+
Sbjct: 294 LSGEIPETICSLPNLENFTYSYNYFCGEPPT---CLKLPA----NDDQKNCIPD 340


>ref|XP_004134434.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like
           [Cucumis sativus] gi|449518721|ref|XP_004166385.1|
           PREDICTED: leucine-rich repeat extensin-like protein
           6-like [Cucumis sativus]
          Length = 376

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/124 (70%), Positives = 102/124 (82%)
 Frame = +1

Query: 1   DNPSYQTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELD 180
           D+P  +TVAGIDLNH +ISG LP+ LG L DL LFHINSN F GT+P SF  L LL+ELD
Sbjct: 85  DDPDIRTVAGIDLNHGNISGTLPDDLGLLTDLALFHINSNRFCGTIPNSFRCLTLLFELD 144

Query: 181 ISNNIFSGEFPQVVFSLPSLKFLDIRFNQFQGDIPSNVFNLKLDALFINNNNFQSKIPEN 360
           ISNN FSGEFP V+ SLP+LKFLDIRFN+F GD+PS++F LKLDALFINNN+F   +PEN
Sbjct: 145 ISNNDFSGEFPSVILSLPALKFLDIRFNKFSGDVPSSLFELKLDALFINNNDFNFSLPEN 204

Query: 361 IGNS 372
           IGNS
Sbjct: 205 IGNS 208



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/89 (31%), Positives = 52/89 (58%)
 Frame = +1

Query: 19  TVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELDISNNIF 198
           T+  I +  + + G LP  +G L +LT+F ++ N+  G LP++ + ++ L +L++++N  
Sbjct: 234 TLNEIIITGSGLIGCLPSEIGSLSNLTVFDVSDNNLVGPLPETMAGMKKLEQLNVAHNQL 293

Query: 199 SGEFPQVVFSLPSLKFLDIRFNQFQGDIP 285
           SGE P  + SLP L+     +N F  + P
Sbjct: 294 SGEIPASICSLPKLQNFTFSYNFFCSEPP 322


>ref|NP_188919.1| leucine-rich repeat extensin-like protein 6 [Arabidopsis thaliana]
           gi|75335502|sp|Q9LUI1.1|LRX6_ARATH RecName:
           Full=Leucine-rich repeat extensin-like protein 6;
           Short=AtLRX6; Short=LRR/EXTENSIN6; AltName: Full=Cell
           wall hydroxyproline-rich glycoprotein; Flags: Precursor
           gi|9279698|dbj|BAB01255.1| extensin protein-like
           [Arabidopsis thaliana] gi|219291096|gb|ACL13984.1|
           At3g22800 [Arabidopsis thaliana]
           gi|332643157|gb|AEE76678.1| leucine-rich repeat
           extensin-like protein 6 [Arabidopsis thaliana]
          Length = 470

 Score =  181 bits (459), Expect = 6e-44
 Identities = 87/124 (70%), Positives = 101/124 (81%)
 Frame = +1

Query: 1   DNPSYQTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELD 180
           DNP   TVAGIDLNHA+I+GYLP  LG L DL LFHINSN F G LP++   L LL+ELD
Sbjct: 94  DNPYVLTVAGIDLNHANIAGYLPLELGLLTDLALFHINSNRFQGQLPKTLKCLHLLHELD 153

Query: 181 ISNNIFSGEFPQVVFSLPSLKFLDIRFNQFQGDIPSNVFNLKLDALFINNNNFQSKIPEN 360
           +SNN  SGEFP V+FSLPSLKFLDIRFN+FQGD+PS +F+L LDALFIN+N FQ ++P N
Sbjct: 154 VSNNKLSGEFPSVIFSLPSLKFLDIRFNEFQGDVPSQLFDLNLDALFINDNKFQFRLPRN 213

Query: 361 IGNS 372
           IGNS
Sbjct: 214 IGNS 217



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/91 (30%), Positives = 56/91 (61%)
 Frame = +1

Query: 16  QTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELDISNNI 195
           +T+  I + ++ ++G L   +G L  LT+F ++ N+  G+LP++  +++ L +L+I++N 
Sbjct: 243 KTLHEIIITNSQLTGCLNREIGLLNQLTVFDVSYNNLVGSLPETIGDMKSLEQLNIAHNK 302

Query: 196 FSGEFPQVVFSLPSLKFLDIRFNQFQGDIPS 288
           FSG  P+ +  LP L+     +N F G+ P+
Sbjct: 303 FSGYIPESICRLPRLENFTYSYNFFSGEPPA 333


>ref|XP_002885524.1| hypothetical protein ARALYDRAFT_898761 [Arabidopsis lyrata subsp.
           lyrata] gi|297331364|gb|EFH61783.1| hypothetical protein
           ARALYDRAFT_898761 [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/124 (69%), Positives = 101/124 (81%)
 Frame = +1

Query: 1   DNPSYQTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELD 180
           DNP   TVAGIDLNHA+I+GYLP  LG L DL LFHINSN F G LP++   L LL+ELD
Sbjct: 146 DNPYVLTVAGIDLNHANIAGYLPIELGLLTDLALFHINSNRFQGQLPKTLKCLELLHELD 205

Query: 181 ISNNIFSGEFPQVVFSLPSLKFLDIRFNQFQGDIPSNVFNLKLDALFINNNNFQSKIPEN 360
           +SNN  SGEFP V+FSLPSLKFLDIRFN+FQGD+P  +F+L LDALFIN+N FQ ++P+N
Sbjct: 206 VSNNKLSGEFPSVIFSLPSLKFLDIRFNEFQGDVPDQLFDLNLDALFINDNKFQFRLPKN 265

Query: 361 IGNS 372
           IGNS
Sbjct: 266 IGNS 269



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/91 (31%), Positives = 58/91 (63%)
 Frame = +1

Query: 16  QTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELDISNNI 195
           +T+  + ++++ I+G L   +G L  LT+F ++ N+  G+LP++  +++ L +L+I++N 
Sbjct: 295 KTLHELIISNSQITGCLNREIGMLNQLTVFDVSYNNLVGSLPETIGDMKSLEQLNIAHNK 354

Query: 196 FSGEFPQVVFSLPSLKFLDIRFNQFQGDIPS 288
           FSG  P+ +  LPSL+     +N F G+ P+
Sbjct: 355 FSGYIPESICRLPSLENFTYSYNFFSGEPPA 385


>ref|XP_002862780.1| hypothetical protein ARALYDRAFT_920276 [Arabidopsis lyrata subsp.
           lyrata] gi|297308501|gb|EFH39038.1| hypothetical protein
           ARALYDRAFT_920276 [Arabidopsis lyrata subsp. lyrata]
          Length = 360

 Score =  180 bits (456), Expect = 1e-43
 Identities = 86/124 (69%), Positives = 101/124 (81%)
 Frame = +1

Query: 1   DNPSYQTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELD 180
           DNP   TVAGIDLNHA+I+GYLP  LG L DL LFHINSN F G LP++   L LL+ELD
Sbjct: 95  DNPYVLTVAGIDLNHANIAGYLPIELGLLTDLALFHINSNRFQGQLPKTLKCLELLHELD 154

Query: 181 ISNNIFSGEFPQVVFSLPSLKFLDIRFNQFQGDIPSNVFNLKLDALFINNNNFQSKIPEN 360
           +SNN  SGEFP V+FSLPSLKFLDIRFN+FQGD+P  +F+L LDALFIN+N FQ ++P+N
Sbjct: 155 VSNNKLSGEFPSVIFSLPSLKFLDIRFNEFQGDVPDQLFDLNLDALFINDNKFQFRLPKN 214

Query: 361 IGNS 372
           IGNS
Sbjct: 215 IGNS 218



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/91 (31%), Positives = 58/91 (63%)
 Frame = +1

Query: 16  QTVAGIDLNHADISGYLPEPLGHLKDLTLFHINSNHFSGTLPQSFSNLRLLYELDISNNI 195
           +T+  + ++++ I+G L   +G L  LT+F ++ N+  G+LP++  +++ L +L+I++N 
Sbjct: 244 KTLHELIISNSQITGCLNREIGILNQLTVFDVSYNNLVGSLPETIGDMKSLEQLNIAHNK 303

Query: 196 FSGEFPQVVFSLPSLKFLDIRFNQFQGDIPS 288
           FSG  P+ +  LPSL+     +N F G+ P+
Sbjct: 304 FSGYIPESICRLPSLENFTYSYNFFSGEPPA 334


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