BLASTX nr result
ID: Cnidium21_contig00039795
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00039795 (298 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v... 78 9e-13 emb|CBI40528.3| unnamed protein product [Vitis vinifera] 78 9e-13 ref|XP_002523351.1| eukaryotic translation initiation factor 3 s... 72 5e-11 ref|NP_171639.3| tetratricopeptide repeat-containing protein [Ar... 71 1e-10 ref|NP_001184884.1| tetratricopeptide repeat-containing protein ... 71 1e-10 >ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera] Length = 1863 Score = 77.8 bits (190), Expect = 9e-13 Identities = 47/98 (47%), Positives = 52/98 (53%) Frame = +1 Query: 4 AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183 AHVRR+LDIVACTT FGPS D+G+ A AQD Sbjct: 106 AHVRRVLDIVACTTCFGPS--PSDAGKNAQGAQDKNSGNKSSKALANAKQSSSSSPPPTP 163 Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297 G+GE+ NS PKLGSFYEFFSLSHLTPPL Sbjct: 164 SSANE-----GEGEMSNSCPKLGSFYEFFSLSHLTPPL 196 >emb|CBI40528.3| unnamed protein product [Vitis vinifera] Length = 1446 Score = 77.8 bits (190), Expect = 9e-13 Identities = 47/98 (47%), Positives = 52/98 (53%) Frame = +1 Query: 4 AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183 AHVRR+LDIVACTT FGPS D+G+ A AQD Sbjct: 106 AHVRRVLDIVACTTCFGPS--PSDAGKNAQGAQDKNSGNKSSKALANAKQSSSSSPPPTP 163 Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297 G+GE+ NS PKLGSFYEFFSLSHLTPPL Sbjct: 164 SSANE-----GEGEMSNSCPKLGSFYEFFSLSHLTPPL 196 >ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223537439|gb|EEF39067.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 1872 Score = 72.0 bits (175), Expect = 5e-11 Identities = 46/102 (45%), Positives = 51/102 (50%), Gaps = 5/102 (4%) Frame = +1 Query: 4 AHVRRLLDIVACTTSFGPSVK-----KEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXX 168 AHVRRLLDIVACTT FGPS K DSG+ AQD + Sbjct: 106 AHVRRLLDIVACTTWFGPSGSAQDKCKPDSGKKVQDAQDKTAKKTRVKSQSTMTADKQSP 165 Query: 169 XXXXXXXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPP 294 +GE+ +S PKLGSFYEFFSLSHLTPP Sbjct: 166 LSKEVAVD-------AEGEMSHSRPKLGSFYEFFSLSHLTPP 200 >ref|NP_171639.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332189150|gb|AEE27271.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 1797 Score = 70.9 bits (172), Expect = 1e-10 Identities = 44/98 (44%), Positives = 48/98 (48%) Frame = +1 Query: 4 AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183 AHVRRLLDIVACTT FGPS +K DS + A G Sbjct: 106 AHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGGKNSKQSDTSPPPSPASKDTVVDEA- 164 Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297 GE +S PKLGSFYEFFSL+HLTPPL Sbjct: 165 ------------GETSHSFPKLGSFYEFFSLAHLTPPL 190 >ref|NP_001184884.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gi|332189151|gb|AEE27272.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 1787 Score = 70.9 bits (172), Expect = 1e-10 Identities = 44/98 (44%), Positives = 48/98 (48%) Frame = +1 Query: 4 AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183 AHVRRLLDIVACTT FGPS +K DS + A G Sbjct: 106 AHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGGKNSKQSDTSPPPSPASKDTVVDEA- 164 Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297 GE +S PKLGSFYEFFSL+HLTPPL Sbjct: 165 ------------GETSHSFPKLGSFYEFFSLAHLTPPL 190