BLASTX nr result

ID: Cnidium21_contig00039795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039795
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v...    78   9e-13
emb|CBI40528.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002523351.1| eukaryotic translation initiation factor 3 s...    72   5e-11
ref|NP_171639.3| tetratricopeptide repeat-containing protein [Ar...    71   1e-10
ref|NP_001184884.1| tetratricopeptide repeat-containing protein ...    71   1e-10

>ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1863

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/98 (47%), Positives = 52/98 (53%)
 Frame = +1

Query: 4   AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183
           AHVRR+LDIVACTT FGPS    D+G+ A  AQD                          
Sbjct: 106 AHVRRVLDIVACTTCFGPS--PSDAGKNAQGAQDKNSGNKSSKALANAKQSSSSSPPPTP 163

Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297
                     G+GE+ NS PKLGSFYEFFSLSHLTPPL
Sbjct: 164 SSANE-----GEGEMSNSCPKLGSFYEFFSLSHLTPPL 196


>emb|CBI40528.3| unnamed protein product [Vitis vinifera]
          Length = 1446

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/98 (47%), Positives = 52/98 (53%)
 Frame = +1

Query: 4   AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183
           AHVRR+LDIVACTT FGPS    D+G+ A  AQD                          
Sbjct: 106 AHVRRVLDIVACTTCFGPS--PSDAGKNAQGAQDKNSGNKSSKALANAKQSSSSSPPPTP 163

Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297
                     G+GE+ NS PKLGSFYEFFSLSHLTPPL
Sbjct: 164 SSANE-----GEGEMSNSCPKLGSFYEFFSLSHLTPPL 196


>ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223537439|gb|EEF39067.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 1872

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 46/102 (45%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
 Frame = +1

Query: 4   AHVRRLLDIVACTTSFGPSVK-----KEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXX 168
           AHVRRLLDIVACTT FGPS       K DSG+    AQD             +       
Sbjct: 106 AHVRRLLDIVACTTWFGPSGSAQDKCKPDSGKKVQDAQDKTAKKTRVKSQSTMTADKQSP 165

Query: 169 XXXXXXXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPP 294
                           +GE+ +S PKLGSFYEFFSLSHLTPP
Sbjct: 166 LSKEVAVD-------AEGEMSHSRPKLGSFYEFFSLSHLTPP 200


>ref|NP_171639.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332189150|gb|AEE27271.1| tetratricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1797

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/98 (44%), Positives = 48/98 (48%)
 Frame = +1

Query: 4   AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183
           AHVRRLLDIVACTT FGPS +K DS + A     G                         
Sbjct: 106 AHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGGKNSKQSDTSPPPSPASKDTVVDEA- 164

Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297
                       GE  +S PKLGSFYEFFSL+HLTPPL
Sbjct: 165 ------------GETSHSFPKLGSFYEFFSLAHLTPPL 190


>ref|NP_001184884.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332189151|gb|AEE27272.1| tetratricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 1787

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 44/98 (44%), Positives = 48/98 (48%)
 Frame = +1

Query: 4   AHVRRLLDIVACTTSFGPSVKKEDSGEIAPAAQDGXXXXXXXXXXXXLXXXXXXXXXXXX 183
           AHVRRLLDIVACTT FGPS +K DS + A     G                         
Sbjct: 106 AHVRRLLDIVACTTCFGPSPEKSDSVKSAQVKGGGKNSKQSDTSPPPSPASKDTVVDEA- 164

Query: 184 XXXXXXXXXXGDGELGNSSPKLGSFYEFFSLSHLTPPL 297
                       GE  +S PKLGSFYEFFSL+HLTPPL
Sbjct: 165 ------------GETSHSFPKLGSFYEFFSLAHLTPPL 190


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