BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039780
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   296   5e-78
ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containi...   284   2e-74
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   281   1e-73
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   278   1e-72
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar...   276   5e-72

>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  296 bits (757), Expect = 5e-78
 Identities = 139/201 (69%), Positives = 170/201 (84%), Gaps = 4/201 (1%)
 Frame = +3

Query: 255 LSGGLDVKS---VRTYCSGENGD-GSNEWTEDIDYLDESGKFLYRGKGIRSVEPGIDDHV 422
           +S G  VK+   VR YC+G+NG+ GS EWTEDI+YLDESG  +Y GKGIRSVEPG+DDHV
Sbjct: 19  VSNGGHVKANSFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPGVDDHV 78

Query: 423 MVGGVKRPFLNASAVAKIVEIVKRWRWGPDMETQLDKLQFVPNMIHVKQALKVVGDVDAS 602
           M+GG+K+P LNASAVAKIVE+VKRW+WGP++ETQLDKLQFVPNM HV QALK++ + DA 
Sbjct: 79  MIGGLKKPILNASAVAKIVEVVKRWKWGPELETQLDKLQFVPNMTHVVQALKIINESDAL 138

Query: 603 LTLFRWAKRQAWYMPSDECYATLFDTLNGSRDFDGIQAMFHELILDSEKSGASPTFSSYN 782
           L+LF+WAKRQ WY+P+DECY  LFD LN SRDFDGIQ++F E++ DS KS     FS+YN
Sbjct: 139 LSLFKWAKRQTWYVPNDECYVMLFDGLNQSRDFDGIQSLFDEMVCDSIKSATQ--FSAYN 196

Query: 783 KVIQYLAKAEKLEVSFCCYKK 845
           +V++YLAKAEKLEVSFCC+KK
Sbjct: 197 RVLKYLAKAEKLEVSFCCFKK 217


>ref|XP_004138818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
           gi|449490234|ref|XP_004158545.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g79490,
           mitochondrial-like [Cucumis sativus]
          Length = 823

 Score =  284 bits (727), Expect = 2e-74
 Identities = 129/188 (68%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = +3

Query: 285 RTYCSG-ENGDGSNEWTEDIDYLDESGKFLYRGKGIRSVEPGIDDHVMVGGVKRPFLNAS 461
           R+YCSG E+G+G  EWTEDI+YLDESG  ++ GKG+RSVEPG+DDHVMVGG+K+PFLNAS
Sbjct: 69  RSYCSGKESGNGGREWTEDIEYLDESGSVIFSGKGVRSVEPGVDDHVMVGGLKKPFLNAS 128

Query: 462 AVAKIVEIVKRWRWGPDMETQLDKLQFVPNMIHVKQALKVVGDVDASLTLFRWAKRQAWY 641
           AVAKIVE+V+RW+WGP++E+QL+KLQFVPNM H+ Q LK++ D +ASL+LFRWAKRQ+WY
Sbjct: 129 AVAKIVEVVRRWKWGPELESQLEKLQFVPNMTHITQVLKIIDDAEASLSLFRWAKRQSWY 188

Query: 642 MPSDECYATLFDTLNGSRDFDGIQAMFHELILDSEKSGASPTFSSYNKVIQYLAKAEKLE 821
            P+DECY  LFD LN  RDFD IQ +F E++ D   S  + +FS+YN+VIQYLAKAEKLE
Sbjct: 189 SPNDECYGLLFDGLNQRRDFDAIQLLFDEVVRDL-SSDETVSFSAYNRVIQYLAKAEKLE 247

Query: 822 VSFCCYKK 845
           VSFCC+KK
Sbjct: 248 VSFCCFKK 255


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  281 bits (720), Expect = 1e-73
 Identities = 131/188 (69%), Positives = 157/188 (83%), Gaps = 1/188 (0%)
 Frame = +3

Query: 285 RTYCSGE-NGDGSNEWTEDIDYLDESGKFLYRGKGIRSVEPGIDDHVMVGGVKRPFLNAS 461
           R YCSG  N  GS +WTEDI+YLDESG  +Y GKGIRSVEPG+DDHVMVGG+K+PFLN +
Sbjct: 92  RNYCSGNINEGGSAKWTEDIEYLDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPFLNVA 151

Query: 462 AVAKIVEIVKRWRWGPDMETQLDKLQFVPNMIHVKQALKVVGDVDASLTLFRWAKRQAWY 641
           AVAKIVEIVKRW+WGP++ETQLDKLQFVP+M HV QALK++ D D  L+LF+WAKRQ WY
Sbjct: 152 AVAKIVEIVKRWKWGPELETQLDKLQFVPSMTHVVQALKIINDADGMLSLFKWAKRQTWY 211

Query: 642 MPSDECYATLFDTLNGSRDFDGIQAMFHELILDSEKSGASPTFSSYNKVIQYLAKAEKLE 821
           +  DECYA LFD LN  RDFDGIQ++F E++ DS K G S  + +YN+VIQ+LAKAEKLE
Sbjct: 212 VVDDECYALLFDGLNKIRDFDGIQSLFDEMVQDSSKGGISSVY-AYNRVIQHLAKAEKLE 270

Query: 822 VSFCCYKK 845
           +SFCC+KK
Sbjct: 271 LSFCCFKK 278


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
           gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 832

 Score =  278 bits (711), Expect = 1e-72
 Identities = 134/225 (59%), Positives = 173/225 (76%), Gaps = 14/225 (6%)
 Frame = +3

Query: 213 NFSLFSQHLIKFGFLSG----------GLDVKS---VRTYCSGENGDG-SNEWTEDIDYL 350
           N  L S   ++ GF             GL  +S   VR +CS ++G   S+ WTE+++YL
Sbjct: 41  NIRLLSSFTVRNGFCPDCSVPRDPNFVGLTTQSRSIVRRFCSEKSGGSESSGWTEEVEYL 100

Query: 351 DESGKFLYRGKGIRSVEPGIDDHVMVGGVKRPFLNASAVAKIVEIVKRWRWGPDMETQLD 530
           DESG  L+ GKGIRSVEPG+DDHVMVGG+K+P++NASAVAKIVE+V+RW+WGP++ETQLD
Sbjct: 101 DESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNASAVAKIVEVVQRWKWGPELETQLD 160

Query: 531 KLQFVPNMIHVKQALKVVGDVDASLTLFRWAKRQAWYMPSDECYATLFDTLNGSRDFDGI 710
           KLQFVPNM+H+ Q+LK+V +VDA+L+LFRWAK+Q WY+PSDECY  LFD LN  RDF GI
Sbjct: 161 KLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGI 220

Query: 711 QAMFHELILDSEKSGASPTFSSYNKVIQYLAKAEKLEVSFCCYKK 845
           Q++F E++ DS   G   +F +YN+VIQYLAKAEKLEV+FCC+KK
Sbjct: 221 QSLFEEMVQDSSSHG-DLSFGAYNQVIQYLAKAEKLEVAFCCFKK 264


>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
           DEFECTIVE 2217; Flags: Precursor
           gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
           thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  276 bits (705), Expect = 5e-72
 Identities = 125/189 (66%), Positives = 162/189 (85%), Gaps = 1/189 (0%)
 Frame = +3

Query: 282 VRTYCSGENGDG-SNEWTEDIDYLDESGKFLYRGKGIRSVEPGIDDHVMVGGVKRPFLNA 458
           VR +CS + G   S+ WTE+++YLDESG  L+ GKGIRSVEPG+DDHVMVGG+K+P++NA
Sbjct: 81  VRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLDDHVMVGGLKKPYMNA 140

Query: 459 SAVAKIVEIVKRWRWGPDMETQLDKLQFVPNMIHVKQALKVVGDVDASLTLFRWAKRQAW 638
           S+VAKIVE+V+RW+WGP++ETQLDKLQFVPNM+H+ Q+LK+V +VDA+L+LFRWAK+Q W
Sbjct: 141 SSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVKEVDAALSLFRWAKKQPW 200

Query: 639 YMPSDECYATLFDTLNGSRDFDGIQAMFHELILDSEKSGASPTFSSYNKVIQYLAKAEKL 818
           Y+PSDECY  LFD LN  RDF GIQ++F E++ DS   G   +F++YN+VIQYLAKAEKL
Sbjct: 201 YLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHG-DLSFNAYNQVIQYLAKAEKL 259

Query: 819 EVSFCCYKK 845
           EV+FCC+KK
Sbjct: 260 EVAFCCFKK 268