BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039750
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191790.1| pre-mRNA-splicing factor ATP-dependent RNA heli...   117   1e-24
ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Med...   116   2e-24
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor...   116   2e-24
ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arab...   114   6e-24
gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| T...   114   8e-24

>ref|NP_191790.1| pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
           [Arabidopsis thaliana] gi|7340702|emb|CAB82945.1|
           ATP-dependent RNA helicase-like protein [Arabidopsis
           thaliana] gi|21539575|gb|AAM53340.1| ATP-dependent RNA
           helicase-like protein [Arabidopsis thaliana]
           gi|34098783|gb|AAQ56774.1| At3g62310 [Arabidopsis
           thaliana] gi|332646816|gb|AEE80337.1| pre-mRNA-splicing
           factor ATP-dependent RNA helicase DHX15/PRP43
           [Arabidopsis thaliana]
          Length = 726

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/87 (64%), Positives = 67/87 (77%), Gaps = 11/87 (12%)
 Frame = -2

Query: 229 MGTERKRKVSLFDVVDDSAIP-----------NNVLSSINRWNGRPYTQRYYDILDKRKT 83
           MGTERKRK+SLFDV+DD + P             + S IN+WNG+PY+QRYYDIL+KR+T
Sbjct: 1   MGTERKRKISLFDVMDDPSAPAKNAKTSGLPDGGINSLINKWNGKPYSQRYYDILEKRRT 60

Query: 82  LPVWLQKDEFFKQLKDNQTLILVGETG 2
           LPVWLQK+EF K L +NQTLILVGETG
Sbjct: 61  LPVWLQKEEFLKTLNNNQTLILVGETG 87


>ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Medicago truncatula]
           gi|355480419|gb|AES61622.1| ATP-dependent RNA
           helicase-like protein [Medicago truncatula]
          Length = 721

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/86 (69%), Positives = 69/86 (80%), Gaps = 10/86 (11%)
 Frame = -2

Query: 229 MGTERKRKVSLFDVVDDSA----------IPNNVLSSINRWNGRPYTQRYYDILDKRKTL 80
           MGTERKRKVSLFDVVDD+A          I NN+   INRWNG+PY+QRY++IL+KRKTL
Sbjct: 1   MGTERKRKVSLFDVVDDAAAKMVKTNGGLIGNNL---INRWNGKPYSQRYHEILEKRKTL 57

Query: 79  PVWLQKDEFFKQLKDNQTLILVGETG 2
           PVW QK++F K LKDNQTLILVGETG
Sbjct: 58  PVWHQKEDFLKVLKDNQTLILVGETG 83


>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 722

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/84 (69%), Positives = 67/84 (79%), Gaps = 8/84 (9%)
 Frame = -2

Query: 229 MGTERKRKVSLFDVVDDSAIPNNVLSS--------INRWNGRPYTQRYYDILDKRKTLPV 74
           MGTERKRKVSLFDVVDD+A   +  +         INRWNG+PY+QRY+DIL+KRKTLPV
Sbjct: 1   MGTERKRKVSLFDVVDDAAAKMSKSNGGAVAANNLINRWNGKPYSQRYHDILEKRKTLPV 60

Query: 73  WLQKDEFFKQLKDNQTLILVGETG 2
           W QK+EF + LKDNQTLILVGETG
Sbjct: 61  WHQKEEFLQALKDNQTLILVGETG 84


>ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arabidopsis lyrata subsp.
           lyrata] gi|297324286|gb|EFH54707.1| hypothetical protein
           ARALYDRAFT_349295 [Arabidopsis lyrata subsp. lyrata]
          Length = 686

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/87 (66%), Positives = 67/87 (77%), Gaps = 11/87 (12%)
 Frame = -2

Query: 229 MGTERKRKVSLFDVVDD-SAIPNN----------VLSSINRWNGRPYTQRYYDILDKRKT 83
           MGTERKRK+SLFDV+DD SA   N          + S IN+WNG+PY+QRYYDIL+KR+T
Sbjct: 1   MGTERKRKISLFDVMDDPSAAAKNTKISGLADGGINSLINKWNGKPYSQRYYDILEKRRT 60

Query: 82  LPVWLQKDEFFKQLKDNQTLILVGETG 2
           LPVWLQK+EF K L  NQTLILVGETG
Sbjct: 61  LPVWLQKEEFLKTLNSNQTLILVGETG 87


>gb|ACN28016.1| unknown [Zea mays] gi|414866511|tpg|DAA45068.1| TPA: putative RNA
           helicase family protein [Zea mays]
          Length = 721

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/90 (61%), Positives = 68/90 (75%), Gaps = 14/90 (15%)
 Frame = -2

Query: 229 MGTERKRKVSLFDVVDDSAIPNNVLS--------------SINRWNGRPYTQRYYDILDK 92
           MGTERKRKVSLFDVVD++++   + +              S+NRWNGRPYT RY+DIL+K
Sbjct: 1   MGTERKRKVSLFDVVDETSVSAKLRAASNGAAATATGGNPSVNRWNGRPYTARYFDILEK 60

Query: 91  RKTLPVWLQKDEFFKQLKDNQTLILVGETG 2
           R+TLPVW QK+EF + L+DNQTLILVGETG
Sbjct: 61  RRTLPVWQQKEEFLRSLRDNQTLILVGETG 90