BLASTX nr result

ID: Cnidium21_contig00039733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039733
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520470.1| conserved hypothetical protein [Ricinus comm...    75   9e-12
ref|XP_002314143.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
gb|ABK92460.1| unknown [Populus trichocarpa]                           66   4e-09
ref|XP_003597410.1| hypothetical protein MTR_2g097800 [Medicago ...    59   5e-07
ref|XP_002864621.1| hypothetical protein ARALYDRAFT_496051 [Arab...    57   2e-06

>ref|XP_002520470.1| conserved hypothetical protein [Ricinus communis]
           gi|223540312|gb|EEF41883.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 62/200 (31%)
 Frame = -2

Query: 441 EREEFLDELSRKMAEHMLQEED-------------------------EEKVADNNKHK-- 343
           + +++  EL+R+MA +MLQ+++                         EEK+  N++ +  
Sbjct: 77  QEDDYTAELTRQMAHYMLQDDEDRHEEKAWSQEEVSITGKFENLKNNEEKLEYNSRERFL 136

Query: 342 PTRFEPNNV----------------------LQYQGLKYGKEQVKEHKDGSSKA--GFRG 235
            T  EP +                        Q + ++  K+QVK+      +A  GF  
Sbjct: 137 ATSLEPTSASLSMKKPKCQSLEFQSRQALIDYQIRAIQLNKQQVKQFHQNKGRACSGFGN 196

Query: 234 GAVPN-----------GSGMRVVFLGENGSRNGSAGGTGVFIPHATNNQPDHQPRKKPGR 88
           G   +           GS M  VFLGE GSR+GS+ GTGVF+P   +N    + RKKPG 
Sbjct: 197 GQKVSSWVNLQQKQRTGSEMTAVFLGEPGSRSGSSCGTGVFLPRGISN--TCESRKKPG- 253

Query: 87  CSRVLIPERVLHSLKQHHEK 28
           CS VLIP RV+ +LK H +K
Sbjct: 254 CSTVLIPARVVQALKLHFDK 273


>ref|XP_002314143.1| predicted protein [Populus trichocarpa] gi|222850551|gb|EEE88098.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/64 (56%), Positives = 43/64 (67%)
 Frame = -2

Query: 219 GSGMRVVFLGENGSRNGSAGGTGVFIPHATNNQPDHQPRKKPGRCSRVLIPERVLHSLKQ 40
           GS MR VFLG++  R+GS GGTGVF+P    N    Q  KKPG CS VLIP RV+ +LK 
Sbjct: 253 GSEMRAVFLGDSCLRSGSGGGTGVFLPRGIGNTSGSQ--KKPG-CSTVLIPARVVQALKL 309

Query: 39  HHEK 28
           H +K
Sbjct: 310 HFDK 313


>gb|ABK92460.1| unknown [Populus trichocarpa]
          Length = 288

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 36/64 (56%), Positives = 43/64 (67%)
 Frame = -2

Query: 219 GSGMRVVFLGENGSRNGSAGGTGVFIPHATNNQPDHQPRKKPGRCSRVLIPERVLHSLKQ 40
           GS MR VFLG++  R+GS GGTGVF+P    N    Q  KKPG CS VLIP RV+ +LK 
Sbjct: 172 GSEMRAVFLGDSCLRSGSGGGTGVFLPRGIGNTSGSQ--KKPG-CSTVLIPARVVQALKL 228

Query: 39  HHEK 28
           H +K
Sbjct: 229 HFDK 232


>ref|XP_003597410.1| hypothetical protein MTR_2g097800 [Medicago truncatula]
           gi|87241291|gb|ABD33149.1| IMP dehydrogenase/GMP
           reductase, putative [Medicago truncatula]
           gi|355486458|gb|AES67661.1| hypothetical protein
           MTR_2g097800 [Medicago truncatula]
          Length = 321

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 46/133 (34%), Positives = 65/133 (48%), Gaps = 3/133 (2%)
 Frame = -2

Query: 417 LSRKMAEHMLQEEDEEKVADNNKHKPTRFEPNNVLQYQGLKYGKEQVKEHKDGSSKAGFR 238
           + R  +   L EE  + +    KH  +  + + +   Q     KE  K+   G+     R
Sbjct: 144 VDRFSSHKALIEEQIKAIELRKKHYISDIKQHALSPKQNEAKEKEIQKQGNGGNCTRLPR 203

Query: 237 GGAVPNGSG--MRVVFLGENGSRNGSAGGTGVFIPHA-TNNQPDHQPRKKPGRCSRVLIP 67
             +V  G G  M+ VFLG +GSRNG    TGVF+P A T   P    +KK   CS VLIP
Sbjct: 204 LASVQTGGGGMMQAVFLGGSGSRNG----TGVFLPRAGTVVAPSESTKKKGKGCSTVLIP 259

Query: 66  ERVLHSLKQHHEK 28
            RV+ +L+ H +K
Sbjct: 260 ARVVQALQLHFDK 272


>ref|XP_002864621.1| hypothetical protein ARALYDRAFT_496051 [Arabidopsis lyrata subsp.
           lyrata] gi|297310456|gb|EFH40880.1| hypothetical protein
           ARALYDRAFT_496051 [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/69 (47%), Positives = 43/69 (62%)
 Frame = -2

Query: 216 SGMRVVFLGENGSRNGSAGGTGVFIPHATNNQPDHQPRKKPGRCSRVLIPERVLHSLKQH 37
           SG++ VF+  +GSR GS GGTGVF+P       +  PRKK G CS V+IP RV+ +LK H
Sbjct: 184 SGVKAVFVDGSGSRTGS-GGTGVFLPRGHGTVVE--PRKKSG-CSTVIIPARVVEALKVH 239

Query: 36  HEKRNAGQT 10
            +K     T
Sbjct: 240 FDKLGVPST 248


Top