BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039727
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...   112   1e-22
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              112   1e-22
ref|XP_002535134.1| conserved hypothetical protein [Ricinus comm...   103   5e-20
ref|NP_199452.2| pre-mRNA-processing factor 39 [Arabidopsis thal...    71   3e-10
dbj|BAB11095.1| unnamed protein product [Arabidopsis thaliana]         71   3e-10

>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score =  112 bits (280), Expect = 1e-22
 Identities = 76/201 (37%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
 Frame = -2

Query: 883  IANAMRSSPDVAQGLSTKDKEELSCLYLEYIDLCGTNDDVRKAWKRHIKLFPHLIRTTTS 704
            +ANA+    DV+QGLS KD E +S LYLE++DLCGT  DV+KAW RHIKLFPH +RT + 
Sbjct: 527  VANAISPGTDVSQGLSAKDGEYISRLYLEFVDLCGTIYDVKKAWNRHIKLFPHCLRTMSI 586

Query: 703  NNNPNATHQLLDMAMEARK--MKPLNQLPKG-HGSGHLIQIPVEEEELSTPENTGLCLDQ 533
               P  + + L +AME R   +  +   P G  GS HL  IP+EE+ LS PEN  +  +Q
Sbjct: 587  YKYPATSSKPLRIAMEGRPDIIAAMPCHPFGDSGSDHLALIPIEEQGLSCPENHDIHSEQ 646

Query: 532  VVAEKVQNGDGDSVQKEQLS---PRNEVLCREDVAGVDSKQKFLHQFENDVIGAMESTQG 362
            VV  +++    +   +E L    P+     RE+ +  +     + ++       +ES Q 
Sbjct: 647  VVNVQLEPEAANKSAQEGLQLVIPKVPGQHREEASEPNVSDSVVKEYNE-----IESVQA 701

Query: 361  MAEKQSEQAASRSEELIKEVE 299
            +       A SR+ +L +EVE
Sbjct: 702  LL------ALSRANDLQQEVE 716


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  112 bits (280), Expect = 1e-22
 Identities = 76/201 (37%), Positives = 111/201 (55%), Gaps = 6/201 (2%)
 Frame = -2

Query: 883  IANAMRSSPDVAQGLSTKDKEELSCLYLEYIDLCGTNDDVRKAWKRHIKLFPHLIRTTTS 704
            +ANA+    DV+QGLS KD E +S LYLE++DLCGT  DV+KAW RHIKLFPH +RT + 
Sbjct: 482  VANAISPGTDVSQGLSAKDGEYISRLYLEFVDLCGTIYDVKKAWNRHIKLFPHCLRTMSI 541

Query: 703  NNNPNATHQLLDMAMEARK--MKPLNQLPKG-HGSGHLIQIPVEEEELSTPENTGLCLDQ 533
               P  + + L +AME R   +  +   P G  GS HL  IP+EE+ LS PEN  +  +Q
Sbjct: 542  YKYPATSSKPLRIAMEGRPDIIAAMPCHPFGDSGSDHLALIPIEEQGLSCPENHDIHSEQ 601

Query: 532  VVAEKVQNGDGDSVQKEQLS---PRNEVLCREDVAGVDSKQKFLHQFENDVIGAMESTQG 362
            VV  +++    +   +E L    P+     RE+ +  +     + ++       +ES Q 
Sbjct: 602  VVNVQLEPEAANKSAQEGLQLVIPKVPGQHREEASEPNVSDSVVKEYNE-----IESVQA 656

Query: 361  MAEKQSEQAASRSEELIKEVE 299
            +       A SR+ +L +EVE
Sbjct: 657  LL------ALSRANDLQQEVE 671


>ref|XP_002535134.1| conserved hypothetical protein [Ricinus communis]
            gi|223523950|gb|EEF27249.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 663

 Score =  103 bits (257), Expect = 5e-20
 Identities = 89/306 (29%), Positives = 135/306 (44%), Gaps = 15/306 (4%)
 Frame = -2

Query: 883  IANAMRSSPDVAQGLSTKDKEELSCLYLEYIDLCGTNDDVRKAWKRHIKLFPHLIRTTTS 704
            +ANA+     V+QGLSTKD E++S LYLE++DLCGT +DVRKAW RH+KLFP   RT   
Sbjct: 139  VANAISPGTSVSQGLSTKDGEDISRLYLEFVDLCGTVNDVRKAWHRHVKLFPSTARTALF 198

Query: 703  NNNPNATHQLLDMAMEARKMKPLNQLPKGHGSGHLIQIPVEEEELSTPENTGLCLDQVVA 524
            +     T   +DM  E   +   +QL     S  LIQ  +EE++LS+P+     +     
Sbjct: 199  HPAMGTTQWKIDMEEEETLVNLPHQLSGDSSSHCLIQSSLEEKKLSSPQINDTQVAHPAT 258

Query: 523  EK----VQNGD----GDSVQKEQLSPRNEVLCRE---DVAGVDSKQKFLHQFENDVIGAM 377
            ++    + N D      +VQ+  LS  +     +   DV         +H+    V   +
Sbjct: 259  DQKLPLLTNHDMLPNRAAVQESPLSENHREHSDQENVDVLQSGESDNIIHEVVCPVPLKV 318

Query: 376  ESTQGMAEKQSEQAASRSEELIKEVEQCTVLNVTSEFLXXXXXXSDIHEMEENELE---- 209
                G   K   Q A+R+E +   +E     +V  EF            +E   L+    
Sbjct: 319  SEPSGDVIKPKCQGANRTENMPASLEFSKEHDVEKEFGQESEQDLKPPSLERLSLDPQDS 378

Query: 208  KHPKPVHLEKVSQSSWEKETRDITTMELQEHGVGQKSSFSDGNILELGPSEEIYVTTNAK 29
            K P P+    VS          ++   LQ+  + Q+ S S+  +LE         + N K
Sbjct: 379  KSPSPI--SPVSDDYGAPRNTSLSDEGLQKSELAQRHSMSNETMLE--------TSQNVK 428

Query: 28   RSPPIN 11
              P I+
Sbjct: 429  LDPSIS 434


>ref|NP_199452.2| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
           gi|332007996|gb|AED95379.1| pre-mRNA-processing factor
           39 [Arabidopsis thaliana]
          Length = 1036

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
 Frame = -2

Query: 856 DVAQGLSTKDKEELSCLYLEYIDLCGTNDDVRKAWKRHIKLFPHLIRTTTSNNNP--NAT 683
           D + GLS +DKEE+S LY+E+IDL GT  DVRKA  RHIKLFPH  R     + P  N  
Sbjct: 513 DSSDGLSAEDKEEISNLYMEFIDLSGTIHDVRKALGRHIKLFPHSARAKLRGSRPSGNLF 572

Query: 682 HQLLDMAMEARKMKPLNQ-LPKGHGSGHLIQIPVEEEELSTPENTG 548
            +L+    + R+   LNQ L    G   ++  P +E++ S+ ++ G
Sbjct: 573 RELIQRREKTRER--LNQDLLTNKGISSIVDSPPKEKKESSLDSYG 616


>dbj|BAB11095.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1022

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
 Frame = -2

Query: 856 DVAQGLSTKDKEELSCLYLEYIDLCGTNDDVRKAWKRHIKLFPHLIRTTTSNNNP--NAT 683
           D + GLS +DKEE+S LY+E+IDL GT  DVRKA  RHIKLFPH  R     + P  N  
Sbjct: 513 DSSDGLSAEDKEEISNLYMEFIDLSGTIHDVRKALGRHIKLFPHSARAKLRGSRPSGNLF 572

Query: 682 HQLLDMAMEARKMKPLNQ-LPKGHGSGHLIQIPVEEEELSTPENTG 548
            +L+    + R+   LNQ L    G   ++  P +E++ S+ ++ G
Sbjct: 573 RELIQRREKTRER--LNQDLLTNKGISSIVDSPPKEKKESSLDSYG 616