BLASTX nr result

ID: Cnidium21_contig00039658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039658
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF99297.1| transposon protein, putative, CACTA, En/Spm sub-c...    69   6e-10
gb|AAO37996.1| transposon protein, putative, CACTA, En/Spm sub-c...    69   6e-10
gb|AAX96804.1| transposon protein, putative, CACTA, En/Spm sub-c...    68   1e-09
ref|XP_003597128.1| TNP1 [Medicago truncatula] gi|355486176|gb|A...    68   2e-09
gb|AAT58819.1| unknown protein [Oryza sativa Japonica Group]           68   2e-09

>gb|ABF99297.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 859

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
 Frame = +3

Query: 18  ESVNPSILSRERSGRSYDWVRARTKPLEGGGYYFPNEKTKEVFHKMR------QVSDGSW 179
           ES  P +       R+ +W RAR +  + G  + PN + + V+  ++      Q S  + 
Sbjct: 191 ESCTPLVFGDIPHPRARNWARARYQKHDDGTIFMPNAEDQRVYEAIKELVAEQQASQEAC 250

Query: 180 TPGGHDDILSRALGRKEHGGRVRGVGGSAKIK----DVFGSGKNKHSAVVSLDEL--ATI 341
           +    DD+L++ALG KEH GR RGVG S   K    D     K + S     D    A I
Sbjct: 251 SQRREDDLLTKALGNKEHHGRTRGVGSSVNWKYGFPDYAWQYKKRTSNKAEKDARLEAKI 310

Query: 342 TQEITKKVKKECEETMNELMNSKLEGIFNHLKQM----AVSLPDDIGSPKIENVRSSCQS 509
            + I  ++  E +E + E M +K+       +Q+    A ++  ++GSP     RSSC S
Sbjct: 311 RESIRAELTSEFDEKL-ESMRAKIRQEIREEQQIPQAAAAAVHKELGSP--TEKRSSCAS 367

Query: 510 VDREDD-------FSNLKNPTLCSLCVIHPEKGRVVVARGTVF 617
            +  ++         ++  PT C+L V       V+ A G  +
Sbjct: 368 TELAENPTSVDSAVDHITEPTSCTLTVRVMPTFTVLAAEGLAY 410


>gb|AAO37996.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 866

 Score = 69.3 bits (168), Expect = 6e-10
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 23/223 (10%)
 Frame = +3

Query: 18  ESVNPSILSRERSGRSYDWVRARTKPLEGGGYYFPNEKTKEVFHKMR------QVSDGSW 179
           ES  P +       R+ +W RAR +  + G  + PN + + V+  ++      Q S  + 
Sbjct: 198 ESCTPLVFGDIPHPRARNWARARYQKHDDGTIFMPNAEDQRVYEAIKELVAEQQASQEAC 257

Query: 180 TPGGHDDILSRALGRKEHGGRVRGVGGSAKIK----DVFGSGKNKHSAVVSLDEL--ATI 341
           +    DD+L++ALG KEH GR RGVG S   K    D     K + S     D    A I
Sbjct: 258 SQRREDDLLTKALGNKEHHGRTRGVGSSVNWKYGFPDYAWQYKKRTSNKAEKDARLEAKI 317

Query: 342 TQEITKKVKKECEETMNELMNSKLEGIFNHLKQM----AVSLPDDIGSPKIENVRSSCQS 509
            + I  ++  E +E + E M +K+       +Q+    A ++  ++GSP     RSSC S
Sbjct: 318 RESIRAELTSEFDEKL-ESMRAKIRQEIREEQQIPQAAAAAVHKELGSP--TEKRSSCAS 374

Query: 510 VDREDD-------FSNLKNPTLCSLCVIHPEKGRVVVARGTVF 617
            +  ++         ++  PT C+L V       V+ A G  +
Sbjct: 375 TELAENPTSVDSAVDHITEPTSCTLTVRVMPTFTVLAAEGLAY 417


>gb|AAX96804.1| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group] gi|77549998|gb|ABA92795.1| transposon
           protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 838

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 23/223 (10%)
 Frame = +3

Query: 18  ESVNPSILSRERSGRSYDWVRARTKPLEGGGYYFPNEKTKEVFHKMR------QVSDGSW 179
           ES  P +       R+ +W RAR +  + G  + PN + + V+  ++      Q S  + 
Sbjct: 198 ESNTPLVFGDIPHPRARNWARARYQKNDDGTIFMPNAEDQRVYESIKELVAEKQASQEAC 257

Query: 180 TPGGHDDILSRALGRKEHGGRVRGVGGSAKIKDVF----------GSGKNKHSAVVSLDE 329
           +    DD+L++ALG KEH GR RGVG S   K  F           S K +  A +    
Sbjct: 258 SQRREDDLLTKALGNKEHHGRTRGVGSSVPWKYGFPDYAWQYKKRTSNKAEKDARLEAKI 317

Query: 330 LATITQEITKKVKKECEETMNELMNSKLEGIFNHLKQMAVSLPDDIGSPKIENVRSSCQS 509
            A+I  E+T +  ++  E+M   +  ++     + + +A +  +++GSP     RSSC S
Sbjct: 318 RASIRAELTSEFDEKL-ESMRAKIRQEIREEQQNPQAIAAATHEELGSP--TQKRSSCAS 374

Query: 510 VDR-------EDDFSNLKNPTLCSLCVIHPEKGRVVVARGTVF 617
            +        +    ++  PT C+L +       V  A G  +
Sbjct: 375 TELAKNPTSVDSAVDHITEPTSCTLTIRMMPTFTVPAAEGLAY 417


>ref|XP_003597128.1| TNP1 [Medicago truncatula] gi|355486176|gb|AES67379.1| TNP1 [Medicago
            truncatula]
          Length = 1233

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
 Frame = +3

Query: 3    SLNDSESVNPSILSRERSGRSYDWVRARTKPLEGGGYYFPNEK--TKEVFHKMRQVSDGS 176
            SL DS +  PS  +R        W RAR KP   G Y   + +   +++   + + + G+
Sbjct: 723  SLGDSVAAPPSPPARHEQ-----WKRARQKP--SGDYTSEDSRIIAEKIDSLVEKTAQGT 775

Query: 177  WTPGGHDDILSRALGRKEHGGRVRGVGGSAKIKDVFGS-GKNKHSAVVSLDELATITQEI 353
            + P G  DIL+ A+G+ EH G VRGVG    I+  FG   ++    V S ++L TI  E+
Sbjct: 776  FVPQGRKDILAEAIGKPEHSGFVRGVGRGVGIRQYFGPLERDSTPPVFSSEQLRTIKVEL 835

Query: 354  TKKVKKECEETMNELMNSK 410
            T+++K+E  + +  +  SK
Sbjct: 836  TQQIKEELMQDLEAMGFSK 854


>gb|AAT58819.1| unknown protein [Oryza sativa Japonica Group]
          Length = 866

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 27/227 (11%)
 Frame = +3

Query: 18  ESVNPSILSRERSGRSYDWVRARTKPLEGGGYYFPNEKTKEVFHKMR------QVSDGSW 179
           ES  P +       R+ +W RAR +  + G  + PN + + V+  ++      Q S  + 
Sbjct: 198 ESCTPLVFGDIPHPRARNWARARYQKNDDGTIFMPNAEDQRVYEAIKELVAEQQASQEAC 257

Query: 180 TPGGHDDILSRALGRKEHGGRVRGVGGSAKIKDVF----------GSGKNKHSAVVSLDE 329
           +    DD+L++ALG KEH GR RGVG S   K  F           S K +  A +    
Sbjct: 258 SQRREDDLLTKALGNKEHRGRTRGVGSSVPWKYGFPDYAWQYKKRTSNKAEKDARLEAKI 317

Query: 330 LATITQEITKKVKKECEETMNELMNSKLEGIFNHLKQM----AVSLPDDIGSPKIENVRS 497
            A+I  E+T +  ++ E      M +K+       +Q+    A +   ++GSP     RS
Sbjct: 318 RASIRAELTSEFDEKLES-----MRAKIRQEIREEQQIPQAAAAAAHKELGSP--TEKRS 370

Query: 498 SCQSVDREDD-------FSNLKNPTLCSLCVIHPEKGRVVVARGTVF 617
           SC S +  ++         ++  PT C+L V       V VA G  +
Sbjct: 371 SCASTELAENPTSVDSAVDHITEPTSCTLTVRVMPTFTVPVAEGLAY 417


Top