BLASTX nr result

ID: Cnidium21_contig00039645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039645
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26044.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...    80   1e-13
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...    75   7e-12
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...    65   8e-09
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...    63   3e-08

>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 8/106 (7%)
 Frame = -2

Query: 295 MEDPITQIVSDLETNSPNSL--------ISESXXXXXXXXXXXXLRTEDPVDIDRFFDEL 140
           ME+ I+ I++DLE +S  SL        IS+S            + TED   IDR F++L
Sbjct: 1   MEEVISGILTDLEAHSTASLSDPNPPLPISQSTLSDLQTLLDNAMATEDSHHIDRLFEDL 60

Query: 139 SAKNVSLSALMDPIGSAMESGPTHLAILSAKVYLSLLLCPNAPVLT 2
           S++N+S+S+L+ P+ SAM+S PT +++L+++VYLSLLL  NAPV T
Sbjct: 61  SSRNLSISSLIRPMASAMDSSPTDISLLASRVYLSLLLSLNAPVFT 106


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 8/106 (7%)
 Frame = -2

Query: 295 MEDPITQIVSDLETNSPNSL--------ISESXXXXXXXXXXXXLRTEDPVDIDRFFDEL 140
           ME+ I+ I++DLE +S  SL        IS+S            + TED   IDR F++L
Sbjct: 1   MEEVISGILTDLEAHSTASLSDPNPPLPISQSTLSDLQTLLDNAMATEDSHHIDRLFEDL 60

Query: 139 SAKNVSLSALMDPIGSAMESGPTHLAILSAKVYLSLLLCPNAPVLT 2
           S++N+S+S+L+ P+ SAM+S PT +++L+++VYLSLLL  NAPV T
Sbjct: 61  SSRNLSISSLIRPMASAMDSSPTDISLLASRVYLSLLLSLNAPVFT 106


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
           condensin, putative [Ricinus communis]
          Length = 1313

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/101 (41%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
 Frame = -2

Query: 295 MEDPITQIVSDLETN---SPNSLISESXXXXXXXXXXXXLRTEDPVDIDRFFDELSAKNV 125
           ME+ I+  +S+LE     +P   +S S              T DP  + +FF +LS+K++
Sbjct: 1   MEEIISATISELEETIQTNPTQNLSLSTLENLQSLLD----TNDPQVLAQFFIDLSSKSI 56

Query: 124 SLSALMDPIGSAMESGPTHLAILSAKVYLSLLLCPNAPVLT 2
           S+++L+ P+ S M+SGPTHL++LS+K YLSLLL PN+PV T
Sbjct: 57  SIASLLSPLTSTMDSGPTHLSLLSSKSYLSLLLSPNSPVFT 97


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
 Frame = -2

Query: 310 NQIKKMEDPITQIVSDLET---NSPNSLISESXXXXXXXXXXXXLRTEDPVDIDRFFDEL 140
           + + +ME+ +++++S+LE    N     +SE             L        +  +DEL
Sbjct: 7   HSMTEMEETVSRVISELEDLRGNPQPPPLSEQTLTNLLFLLKHSLS-------ESLYDEL 59

Query: 139 SAKNVSLSALMDPIGSAMESGPTHLAILSAKVYLSLLLCPNAPVLT 2
           S+KN+S S+L+ PI SAM+S P H ++L++ V+LSLLL PNAPV T
Sbjct: 60  SSKNLSPSSLIPPIASAMDSSPPHHSLLASDVFLSLLLAPNAPVFT 105


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
 Frame = -2

Query: 295 MEDPITQIVSDLET-----NSPNSLISESXXXXXXXXXXXXLRTEDPVDIDRFFDELSAK 131
           ME+ +++I+S+LE        P  L  ++              T         +DEL +K
Sbjct: 1   MEETVSRIISELEDLRGNPQPPPPLSEQTLMDLQFLLKHSLTET--------LYDELPSK 52

Query: 130 NVSLSALMDPIGSAMESGPTHLAILSAKVYLSLLLCPNAPVLT 2
           N+S S+L+ PI SAM+S P H ++L++ V+LSLLL PNAPV T
Sbjct: 53  NLSPSSLIPPIASAMDSSPPHHSLLASDVFLSLLLAPNAPVFT 95


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