BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039628
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    58   7e-07
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    55   5e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
 Frame = +2

Query: 122 KGLCFCCDDKPPLILYKP*KWVVSHRC*YKELSVLQAREEEDLSNKEQVKG-EGIVEPIP 298
           KGLCF CD+K          W V H+C  KELSVL   + E+   +  + G E    P  
Sbjct: 414 KGLCFKCDEK----------WGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTE 463

Query: 299 RGFPLNSVNSLVGLPLPTTMKLIGHIGEQEVIATVVP 409
              P  S+NS++GL  P TMKL G I   EV+  + P
Sbjct: 464 EIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDP 500


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
 Frame = +2

Query: 119 EKGLCFCCDDKPPLILYKP*KWVVSHRC*YKELSVLQAREEEDLSNKEQVKGEGIVEP-- 292
           E GLCF CD+K          W + HRC  KELS+L   EEE+      ++      P  
Sbjct: 347 EHGLCFRCDEK----------WAIGHRCKKKELSILLGHEEEEEEYGSLMENIQPAHPDD 396

Query: 293 --IPRGFPLNSVNSLVGLPLPTTMKLIGHIGEQEVIATVVP 409
             +    P  S+NS++G+  P T+K+ G I  Q+VI  V P
Sbjct: 397 SQLEIHSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVDP 437