BLASTX nr result

ID: Cnidium21_contig00039603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039603
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi...   267   1e-69
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]   267   1e-69
ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|2...   265   3e-69
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,...   247   1e-63
ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containi...   241   5e-62

>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Vitis vinifera]
          Length = 1008

 Score =  267 bits (682), Expect = 1e-69
 Identities = 128/172 (74%), Positives = 156/172 (90%)
 Frame = -2

Query: 596  FKVLFTILKKGGIPSEAVSQLQSSYREGKPYSREAVLASVYSVVGLHAFALKSCETFLKA 417
            FKV+FT+LKKGG+P+EAV+QL+SSY+EGKPY+R+AV+ SV+S VGLHAFAL+SCETFL A
Sbjct: 836  FKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNA 895

Query: 416  EVLLDSFAYNVAIYAYGATGRTNEALNIFMKMQDEGLEPDLVTFINLVGCYGRAGMLEGV 237
            EV LDS  YNVAIYAYGA+G  ++AL +FMKMQDEGLEPDLVT+INL GCYG+AGMLEG+
Sbjct: 896  EVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGL 955

Query: 236  KRIHSRLKYGEIDPSESLFKAVVDAYRNANRQDLAELVTQEMRFAFDTQSDP 81
            KRI+S+LKY EI+P+ESLFKA++DAYR+A R DLAELV+QEM+FAFDT   P
Sbjct: 956  KRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEMKFAFDTTMLP 1007


>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score =  267 bits (682), Expect = 1e-69
 Identities = 128/172 (74%), Positives = 156/172 (90%)
 Frame = -2

Query: 596  FKVLFTILKKGGIPSEAVSQLQSSYREGKPYSREAVLASVYSVVGLHAFALKSCETFLKA 417
            FKV+FT+LKKGG+P+EAV+QL+SSY+EGKPY+R+AV+ SV+S VGLHAFAL+SCETFL A
Sbjct: 1141 FKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETFLNA 1200

Query: 416  EVLLDSFAYNVAIYAYGATGRTNEALNIFMKMQDEGLEPDLVTFINLVGCYGRAGMLEGV 237
            EV LDS  YNVAIYAYGA+G  ++AL +FMKMQDEGLEPDLVT+INL GCYG+AGMLEG+
Sbjct: 1201 EVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEGL 1260

Query: 236  KRIHSRLKYGEIDPSESLFKAVVDAYRNANRQDLAELVTQEMRFAFDTQSDP 81
            KRI+S+LKY EI+P+ESLFKA++DAYR+A R DLAELV+QEM+FAFDT   P
Sbjct: 1261 KRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEMKFAFDTTMLP 1312


>ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|222857749|gb|EEE95296.1|
            predicted protein [Populus trichocarpa]
          Length = 810

 Score =  265 bits (678), Expect = 3e-69
 Identities = 129/187 (68%), Positives = 158/187 (84%)
 Frame = -2

Query: 596  FKVLFTILKKGGIPSEAVSQLQSSYREGKPYSREAVLASVYSVVGLHAFALKSCETFLKA 417
            FK+LFT+LKKGG PSE ++QL+S+Y EGKPY+R+AV+ S++SVVGLHA AL+SCE+F KA
Sbjct: 624  FKILFTVLKKGGFPSEGIAQLESAYLEGKPYARQAVITSIFSVVGLHALALESCESFTKA 683

Query: 416  EVLLDSFAYNVAIYAYGATGRTNEALNIFMKMQDEGLEPDLVTFINLVGCYGRAGMLEGV 237
            EV LDSFAYNVAIYAYG++G  ++AL  FMK QDEGLEPDLVT INLV CYG+AGM+EGV
Sbjct: 684  EVALDSFAYNVAIYAYGSSGEIDKALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEGV 743

Query: 236  KRIHSRLKYGEIDPSESLFKAVVDAYRNANRQDLAELVTQEMRFAFDTQSDPESEREEVG 57
            KRI+S+LKYGEI P++SL KAVVDAY+NANR DLAELV Q++RF FD+Q   +SE E   
Sbjct: 744  KRIYSQLKYGEIKPNDSLVKAVVDAYKNANRHDLAELVNQDIRFGFDSQQYSDSEIEAGS 803

Query: 56   DKIPLDF 36
            D+  L F
Sbjct: 804  DESSLGF 810


>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1029

 Score =  247 bits (631), Expect = 1e-63
 Identities = 120/180 (66%), Positives = 153/180 (85%), Gaps = 2/180 (1%)
 Frame = -2

Query: 596  FKVLFTILKKGGIPSEAVSQLQSSYREGKPYSREAVLASVYSVVGLHAFALKSCETFLKA 417
            FK+LFT+LKKGG+P+EAV QL+SSY EGKPY+R+AV+ SV+S+VGLHA A++SC+ F KA
Sbjct: 834  FKILFTVLKKGGLPTEAVMQLESSYHEGKPYARQAVITSVFSLVGLHALAMESCKIFTKA 893

Query: 416  EVLLDSFAYNVAIYAYGATGRTNEALNIFMKMQDEGLEPDLVTFINLVGCYGRAGMLEGV 237
            ++ LD FAYNVAI+AYG++G  ++ALN FMKMQDEGLEPDLVT I LV CYG+AGM+EGV
Sbjct: 894  DIALDLFAYNVAIFAYGSSGEIDKALNTFMKMQDEGLEPDLVTSICLVYCYGKAGMVEGV 953

Query: 236  KRIHSRLKYGEIDPSESLFKAVVDAYRNANRQDLAELVTQEMRFAFDTQ--SDPESEREE 63
            KRI+S+LKY +I PS+S FKAVVDAY +ANR DLAELV QE+R  FD+   SD +S+ ++
Sbjct: 954  KRIYSQLKYRDIKPSDSAFKAVVDAYEDANRHDLAELVNQELRLGFDSPRFSDSDSDSQQ 1013


>ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Glycine max]
          Length = 963

 Score =  241 bits (616), Expect = 5e-62
 Identities = 115/177 (64%), Positives = 153/177 (86%)
 Frame = -2

Query: 596  FKVLFTILKKGGIPSEAVSQLQSSYREGKPYSREAVLASVYSVVGLHAFALKSCETFLKA 417
            FKVLFTILKKGGIP+EAV+QL+SSY+EGKPY+R+    ++YS+VG+H  AL+S +TF+++
Sbjct: 763  FKVLFTILKKGGIPTEAVAQLESSYQEGKPYARQTTFTALYSLVGMHNLALESAQTFIES 822

Query: 416  EVLLDSFAYNVAIYAYGATGRTNEALNIFMKMQDEGLEPDLVTFINLVGCYGRAGMLEGV 237
            EV LDS A+NVAIYAYG+ G  N+ALNI+MKM+DE L PDLVT+I LVGCYG+AGM+EGV
Sbjct: 823  EVDLDSSAFNVAIYAYGSAGDINKALNIYMKMRDEHLGPDLVTYIYLVGCYGKAGMVEGV 882

Query: 236  KRIHSRLKYGEIDPSESLFKAVVDAYRNANRQDLAELVTQEMRFAFDTQSDPESERE 66
            K+I+S+L+YGEI+ +ESLFKA++DAY+  NR+DLAELV+QEM+F F+++   E E E
Sbjct: 883  KQIYSQLEYGEIESNESLFKAIIDAYKICNRKDLAELVSQEMKFTFNSKEHSEIESE 939


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