BLASTX nr result

ID: Cnidium21_contig00039592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039592
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002511182.1| nucleic acid binding protein, putative [Rici...    92   6e-17
ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242...    83   3e-14
ref|XP_004138047.1| PREDICTED: uncharacterized protein LOC101213...    81   8e-14

>ref|XP_002318130.1| predicted protein [Populus trichocarpa] gi|222858803|gb|EEE96350.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 6/97 (6%)
 Frame = +2

Query: 143 PLESKVRS---PKDHHMHNLFEKPSLDLQLSISLRPFRPPESNNSVVLRPILDRANPDIH 313
           P++S +R      DHH H+ F  PSLDLQLSIS+ P + P  +N V+  PI D ++    
Sbjct: 32  PMDSSLRYRPVASDHHQHHQFGGPSLDLQLSISVGPIQGP--SNCVLTGPICDFSDAKTD 89

Query: 314 A---QTLKWQASEEIRLAALEKAYAERVRELTRREME 415
               +TLKWQA+E+I+LAA+EKAYAERVRELTRREME
Sbjct: 90  TSCVETLKWQAAEQIKLAAIEKAYAERVRELTRREME 126


>ref|XP_002511182.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550297|gb|EEF51784.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 179

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 61/126 (48%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
 Frame = +2

Query: 62  EEDHKELQLLXXXXXXXXXXXXXXXXW--PLESKVR---SPKDHHMHNLFEKPSLDLQLS 226
           E+DHKELQLL                +  P  + +R   S      HN F  PSLDLQLS
Sbjct: 3   EDDHKELQLLPSQQSLASSSSCSLMSFRPPDSNSLRYRSSATVSADHNQFGGPSLDLQLS 62

Query: 227 ISLRPFRPPESNNSVVLRPILDRANPDIH---AQTLKWQASEEIRLAALEKAYAERVREL 397
           ISL P + P  +N V+  PI D ++  +     + LKWQA+E+IRLAA+EKAYAERVREL
Sbjct: 63  ISLSPIQAP--SNCVLTGPICDFSDGKVDTGCVEALKWQAAEQIRLAAIEKAYAERVREL 120

Query: 398 TRREME 415
           TRREME
Sbjct: 121 TRREME 126


>ref|XP_002321705.1| predicted protein [Populus trichocarpa] gi|222868701|gb|EEF05832.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 58/126 (46%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
 Frame = +2

Query: 62  EEDHKELQLLXXXXXXXXXXXXXXXXWPLESKVRSPKD-----HHMHNLFEKPSLDLQLS 226
           E D KELQLL                  L+S +R         HH HN F  PSLDLQLS
Sbjct: 3   EGDQKELQLLPSQLSIASSSSSSSL---LDSSLRYKSSVVSDHHHHHNQFGGPSLDLQLS 59

Query: 227 ISLRPFRPPESNNSVVLRPILDRANPDIHA---QTLKWQASEEIRLAALEKAYAERVREL 397
           IS+RP +    +N V+  PI D ++        + LKWQA+E+++LAA+EKAYAERVR+L
Sbjct: 60  ISVRPIQA--QSNCVLTGPICDFSDVKTDTSCVEALKWQAAEQVKLAAIEKAYAERVRDL 117

Query: 398 TRREME 415
           TRREME
Sbjct: 118 TRREME 123


>ref|XP_002283829.1| PREDICTED: uncharacterized protein LOC100242196 [Vitis vinifera]
           gi|147816564|emb|CAN68393.1| hypothetical protein
           VITISV_019529 [Vitis vinifera]
          Length = 169

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 59/121 (48%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
 Frame = +2

Query: 62  EEDHKELQLLXXXXXXXXXXXXXXXXWPLESKVRSPKDHHMHNLFEKPSLDLQLSISLRP 241
           E+D KELQLL                 P +S +R        + FE P LDLQLSISLRP
Sbjct: 3   EDDQKELQLLPSPHSMASSSRMSGR--PSDSSLRYRGIGG--DPFEGPGLDLQLSISLRP 58

Query: 242 FRPPESNNSVVLRPILDRANPDIHAQ---TLKWQASEEIRLAALEKAYAERVRELTRREM 412
            RPP     V+   I +  +    A     LKWQA+E+IRLAA+EKAYAERVRELTRREM
Sbjct: 59  IRPPPEY--VLAGQICEYGDVKQEASCVDALKWQAAEQIRLAAMEKAYAERVRELTRREM 116

Query: 413 E 415
           E
Sbjct: 117 E 117


>ref|XP_004138047.1| PREDICTED: uncharacterized protein LOC101213814 [Cucumis sativus]
           gi|449531703|ref|XP_004172825.1| PREDICTED:
           uncharacterized LOC101213814 [Cucumis sativus]
          Length = 175

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 51/120 (42%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
 Frame = +2

Query: 62  EEDHKELQLLXXXXXXXXXXXXXXXXWPLESKVRSPKDHHMHNLFEKPSLDLQLSISLRP 241
           +ED KELQLL                 P +S     +   +       S+DLQLSISLRP
Sbjct: 3   DEDQKELQLLPTPHSIASSSTSHISSRPSDSSSLRFRSDPLFEAGSGGSVDLQLSISLRP 62

Query: 242 FRPPESNNSVVLRPILDRANPDIHA--QTLKWQASEEIRLAALEKAYAERVRELTRREME 415
            RP  +  +  L    +   P+  +    LKWQA+E+IRLAA+EKAYAERVRELT+RE+E
Sbjct: 63  IRPVTAGGAECLFKYEEVMKPEAASCVDALKWQAAEQIRLAAMEKAYAERVRELTKREIE 122


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