BLASTX nr result

ID: Cnidium21_contig00039539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039539
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                           83   3e-14
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    83   3e-14
emb|CAN82914.1| hypothetical protein VITISV_031085 [Vitis vinifera]    77   2e-12
ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    76   3e-12
ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    76   3e-12

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = -3

Query: 282 GTAVDRLSNLPLNVIDLILEHLPVHDVARMSILSKKWRDVWVMHPHLVLDDLFFKQLLSN 103
           G  +DR+S+LP NVID IL+HL + D+AR SILS+KWRD+W+  P L  D  FF     +
Sbjct: 11  GDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFDKDFF-----D 65

Query: 102 KGSEKDKHAQVSEISRTISNILLVHTGPISKFHL 1
               KD      E+   I+ +LL+H GPI+KF L
Sbjct: 66  LYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTL 99


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = -3

Query: 282 GTAVDRLSNLPLNVIDLILEHLPVHDVARMSILSKKWRDVWVMHPHLVLDDLFFKQLLSN 103
           G  +DR+S+LP NVID IL+HL + D+AR SILS+KWRD+W+  P L  D  FF     +
Sbjct: 92  GDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFDKDFF-----D 146

Query: 102 KGSEKDKHAQVSEISRTISNILLVHTGPISKFHL 1
               KD      E+   I+ +LL+H GPI+KF L
Sbjct: 147 LYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTL 180


>emb|CAN82914.1| hypothetical protein VITISV_031085 [Vitis vinifera]
          Length = 341

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/92 (43%), Positives = 54/92 (58%)
 Frame = -3

Query: 276 AVDRLSNLPLNVIDLILEHLPVHDVARMSILSKKWRDVWVMHPHLVLDDLFFKQLLSNKG 97
           A DR+S LP N+ID IL  LP+HD  R SILS+KWR  W+  P LV +D F +Q+    G
Sbjct: 7   AADRISXLPSNIIDBILVRLPIHDAVRTSILSRKWRYKWLTLPQLVFEDSFSEQMTKELG 66

Query: 96  SEKDKHAQVSEISRTISNILLVHTGPISKFHL 1
              ++     ++   +   LL+H GPI KF L
Sbjct: 67  VLSEE-----KLLAAVYQALLLHKGPIVKFSL 93


>ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355524464|gb|AET04918.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 380

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/94 (43%), Positives = 55/94 (58%)
 Frame = -3

Query: 282 GTAVDRLSNLPLNVIDLILEHLPVHDVARMSILSKKWRDVWVMHPHLVLDDLFFKQLLSN 103
           G  +DR+S+LP NVID ILEHL   D+ R S+LS+KWR +W+  P L     FF      
Sbjct: 11  GDHIDRISDLPSNVIDGILEHLNARDLVRTSVLSRKWRYMWITVPRLEFCQDFFC----- 65

Query: 102 KGSEKDKHAQVSEISRTISNILLVHTGPISKFHL 1
               K K  +  ++SR I+ +L +H GPI KF L
Sbjct: 66  ----KYKDLEALDVSRIITEVLFLHNGPIYKFIL 95


>ref|XP_003588839.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355477887|gb|AES59090.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 532

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/100 (39%), Positives = 62/100 (62%)
 Frame = -3

Query: 300 VRRLCRGTAVDRLSNLPLNVIDLILEHLPVHDVARMSILSKKWRDVWVMHPHLVLDDLFF 121
           +RR   G   DR+S LP +VID IL +LP+ +  + S+LS +WR+ W   P++V D    
Sbjct: 46  IRRTVIGVEPDRISCLPGHVIDQILSYLPIREAVKTSVLSSEWRNKWHTLPNIVFD---- 101

Query: 120 KQLLSNKGSEKDKHAQVSEISRTISNILLVHTGPISKFHL 1
              +SN  + KD    +S++ R + ++LL+H+GPI+KF L
Sbjct: 102 LNCVSNIEAIKDPSIFMSKLLRIVDHVLLLHSGPINKFQL 141


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