BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039500
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   254   5e-66
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   250   1e-64
ref|XP_002885175.1| pentatricopeptide repeat-containing protein ...   249   1e-64
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   220   8e-56
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   220   8e-56

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  254 bits (649), Expect = 5e-66
 Identities = 121/157 (77%), Positives = 139/157 (88%)
 Frame = -2

Query: 473 QNQENPLHSLRFYIWVSNNFPLLEKNQSIRGVLGNVLYRKGPVLLSGELIVDVKNSGFRV 294
           QNQENPL+ L+FYIWVSN  PL  K+QS++GVL N LYRKGPV+LS EL+ D+K SG+R+
Sbjct: 121 QNQENPLYPLKFYIWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRI 180

Query: 293 TEDLVCILIGSWGRLGLAKYCGQVFEQISYLGIVSSTRLYNAVIDALVKSNSLDLAYLKF 114
            E+L+CILIGSWGRLGLAKYC ++F QIS+LGI  STRLYNAVIDALVKSNSLDLAYLKF
Sbjct: 181 NEELLCILIGSWGRLGLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKF 240

Query: 113 QQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQ 3
           QQM  DNC+PDRFTYNILIHGVC+ GVVDEA+RLVKQ
Sbjct: 241 QQMSADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQ 277


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g16890, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
           gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score =  250 bits (638), Expect = 1e-64
 Identities = 117/157 (74%), Positives = 141/157 (89%)
 Frame = -2

Query: 473 QNQENPLHSLRFYIWVSNNFPLLEKNQSIRGVLGNVLYRKGPVLLSGELIVDVKNSGFRV 294
           QNQ+NPLHSLRFY+WVSN  P+  K+QS++ VLGN L+RKGP+LLS EL+ ++++SG+R+
Sbjct: 84  QNQDNPLHSLRFYLWVSNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRI 143

Query: 293 TEDLVCILIGSWGRLGLAKYCGQVFEQISYLGIVSSTRLYNAVIDALVKSNSLDLAYLKF 114
           +++L+C+LIGSWGRLGLAKYC  VF QIS+LG+  STRLYNAVIDALVKSNSLDLAYLKF
Sbjct: 144 SDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKF 203

Query: 113 QQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQ 3
           QQM+ D C+PDRFTYNILIHGVCK GVVDEAIRLVKQ
Sbjct: 204 QQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQ 240


>ref|XP_002885175.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331015|gb|EFH61434.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 653

 Score =  249 bits (637), Expect = 1e-64
 Identities = 116/157 (73%), Positives = 141/157 (89%)
 Frame = -2

Query: 473 QNQENPLHSLRFYIWVSNNFPLLEKNQSIRGVLGNVLYRKGPVLLSGELIVDVKNSGFRV 294
           QNQ+NPLHSLRFY+WVSN  P+  K+QS++ VLGN L+RKGP+LLS EL+ +++ SG+R+
Sbjct: 78  QNQDNPLHSLRFYLWVSNTDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKEIRESGYRI 137

Query: 293 TEDLVCILIGSWGRLGLAKYCGQVFEQISYLGIVSSTRLYNAVIDALVKSNSLDLAYLKF 114
           T++L+C+LIGSWGRLGLAKYC  VF QIS+LG+  STRLYNAVIDALVKSNSL+LAY+KF
Sbjct: 138 TDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLNLAYVKF 197

Query: 113 QQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQ 3
           QQM+ D+C+PDRFTYNILIHGVCK GVVDEAIRLVKQ
Sbjct: 198 QQMRSDDCKPDRFTYNILIHGVCKKGVVDEAIRLVKQ 234


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  220 bits (561), Expect = 8e-56
 Identities = 110/160 (68%), Positives = 131/160 (81%), Gaps = 3/160 (1%)
 Frame = -2

Query: 473 QNQENPLHSLRFYIWVSNNFPLLEKNQSIRGVLGNVLYRKGP---VLLSGELIVDVKNSG 303
           QNQ+NPL ++RFYIWVSN  PLL K Q I+GVL   L+R+GP   VLLS +L+  +K SG
Sbjct: 130 QNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESG 189

Query: 302 FRVTEDLVCILIGSWGRLGLAKYCGQVFEQISYLGIVSSTRLYNAVIDALVKSNSLDLAY 123
            +VTE+L+CIL GSWGRLGLA YC +VF QI  LG+  +TRLYNAV+DAL+KSNSLDLAY
Sbjct: 190 LKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAY 249

Query: 122 LKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQ 3
           LKFQQM   NC PDRFTYNILIHGVC++GVVDEA+RL+KQ
Sbjct: 250 LKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQ 289


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  220 bits (561), Expect = 8e-56
 Identities = 110/160 (68%), Positives = 131/160 (81%), Gaps = 3/160 (1%)
 Frame = -2

Query: 473 QNQENPLHSLRFYIWVSNNFPLLEKNQSIRGVLGNVLYRKGP---VLLSGELIVDVKNSG 303
           QNQ+NPL ++RFYIWVSN  PLL K Q I+GVL   L+R+GP   VLLS +L+  +K SG
Sbjct: 130 QNQDNPLSAIRFYIWVSNVDPLLVKKQLIQGVLVRNLHREGPDRPVLLSVDLLQQIKESG 189

Query: 302 FRVTEDLVCILIGSWGRLGLAKYCGQVFEQISYLGIVSSTRLYNAVIDALVKSNSLDLAY 123
            +VTE+L+CIL GSWGRLGLA YC +VF QI  LG+  +TRLYNAV+DAL+KSNSLDLAY
Sbjct: 190 LKVTEELLCILFGSWGRLGLANYCVEVFGQIGLLGLNPTTRLYNAVMDALIKSNSLDLAY 249

Query: 122 LKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEAIRLVKQ 3
           LKFQQM   NC PDRFTYNILIHGVC++GVVDEA+RL+KQ
Sbjct: 250 LKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEALRLMKQ 289