BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039490
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18968.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   143   1e-32
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   102   3e-20
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   100   9e-20
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                           83   2e-14

>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  150 bits (380), Expect = 8e-35
 Identities = 85/161 (52%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
 Frame = +1

Query: 1    SQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGISDR--AEADHTRRIKKRAKLSDS 174
            SQYPTQA +M+S D  SQL +QS DL  + T+     SDR   EA H+    KRA+L + 
Sbjct: 740  SQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSVHAKRARLLED 799

Query: 175  DRRNSILPSIKSPINPICEINTKENFPTEKPVEVSFAVPDVAAAIEDLLEETSKIPDQKS 354
            + + ++ PS    ++ I ++N+     T    E S  VPDVAAAIEDLLE+TSKI D KS
Sbjct: 800  ESQKTVPPSGAQDMDFISKMNSSGTTITAVTEETSHVVPDVAAAIEDLLEQTSKIHDLKS 859

Query: 355  PGRTGCVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDK 477
            PGRTGC K LFSSDCS LGQDHAD  S F LSKHW++R +K
Sbjct: 860  PGRTGCEKHLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEK 900


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  143 bits (361), Expect = 1e-32
 Identities = 84/171 (49%), Positives = 107/171 (62%), Gaps = 12/171 (7%)
 Frame = +1

Query: 1    SQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGISDR--AEADHTRRIKKRAKLSDS 174
            SQYPTQA +M+S D  SQL +QS DL  + T+     SDR   EA H+    KRA+L + 
Sbjct: 740  SQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSVHAKRARLLED 799

Query: 175  DRRNSILPSIKSPINPICEINTKENFPTEKPVEVSFAVPDVAAAIEDLLEETSKIPDQKS 354
            + + ++ PS    ++ I ++N+     T    E S  VPDVAAAIEDLLE+TSKI D KS
Sbjct: 800  ESQKTVPPSGAQDMDFISKMNSSGTTITAVTEETSHVVPDVAAAIEDLLEQTSKIHDLKS 859

Query: 355  PGRTGC----------VKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDK 477
            PGRTGC          ++ LFSSDCS LGQDHAD  S F LSKHW++R +K
Sbjct: 860  PGRTGCEKHVSLESLTIEQLFSSDCSPLGQDHADSHSSFDLSKHWLNRIEK 910


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  102 bits (254), Expect = 3e-20
 Identities = 69/172 (40%), Positives = 97/172 (56%), Gaps = 13/172 (7%)
 Frame = +1

Query: 1    SQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGI---SDRAEADHTRRIKKRAKLSD 171
            SQ+PTQA +M+SG+  SQL SQS DL+   T+ TG I   S   +A  + +  K+A+L  
Sbjct: 731  SQFPTQAARMISGENPSQLISQSRDLRSAPTQ-TGSIGIFSFGEDAQKSTKYSKKARLLK 789

Query: 172  SDRRNSILPSIKSPINPICEINTKENFPTEKPVEVSFAVPDVAAAIEDLLEETSKIPDQK 351
            SD + + L       +P+  IN+     ++     S  VPDVAAAIEDLLE+TSKI DQK
Sbjct: 790  SDDQEAQLSFHLD--DPVYTINSTRGNDSKDTAGSSHGVPDVAAAIEDLLEQTSKIHDQK 847

Query: 352  SPGRTG----------CVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDK 477
            S G++            ++ L+ SD  ILG+DH    S   +  HW++RT K
Sbjct: 848  SLGKSEYSMFASVESLTIEQLYPSD-PILGEDHGGSHSVIGVPNHWLNRTGK 898


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  100 bits (250), Expect = 9e-20
 Identities = 66/162 (40%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
 Frame = +1

Query: 1    SQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGISDRAEADHT--RRIKKRAKLSDS 174
            SQ+PTQAV+M+S D  SQL+SQS  L+    +      D  E          K+A+L + 
Sbjct: 759  SQFPTQAVQMIS-DLPSQLSSQSQTLRGTTNKNVSCGVDNHETSFRIPSNYSKKARLVEE 817

Query: 175  DRRNSILPSIK-SPINPICEINTKENFPTEKPVEVSFAVPDVAAAIEDLLEETSKIPDQK 351
               ++  PS   S I+   +  +K+N   +   E   AVPDVAAAIEDLLE+TSK+ DQ+
Sbjct: 818  PCLSNKKPSASNSGIHADDKNFSKDNMLIDAG-EAFHAVPDVAAAIEDLLEQTSKMHDQR 876

Query: 352  SPGRTGCVKSLFSSDCSILGQDHADLQSGFALSKHWIHRTDK 477
            SP +TGC +S++ SD S+L +D+++  + F LSKHW++R+ +
Sbjct: 877  SPAQTGCERSIYPSDRSVLSEDNSNPHTVFGLSKHWLNRSGR 918


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 3/125 (2%)
 Frame = +1

Query: 1    SQYPTQAVKMVSGDGASQLTSQSLDLKCLRTELTGGISDRAEADHTRR---IKKRAKLSD 171
            SQ+PTQ  +M+SG   SQ TSQS DLK   T++ GG S  +  +  R+     K+A+L +
Sbjct: 732  SQFPTQPAQMISG--VSQYTSQSQDLKSEPTQI-GGTSITSFGEEVRKSSDFSKKARLLE 788

Query: 172  SDRRNSILPSIKSPINPICEINTKENFPTEKPVEVSFAVPDVAAAIEDLLEETSKIPDQK 351
            S  + S+L S     + IC IN+     ++   E S  V DVAA IEDLLE+TSKI D K
Sbjct: 789  SGGQKSLLSSGVHLSDSICNINSSGGNNSKDNKESSSCVSDVAAVIEDLLEQTSKIHDHK 848

Query: 352  SPGRT 366
            SP RT
Sbjct: 849  SPERT 853