BLASTX nr result

ID: Cnidium21_contig00039486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039486
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   207   2e-51
ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   205   1e-50
emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]   205   1e-50
ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   204   2e-50
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   203   3e-50

>ref|XP_002283100.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 361

 Score =  207 bits (528), Expect = 2e-51
 Identities = 113/268 (42%), Positives = 147/268 (54%), Gaps = 14/268 (5%)
 Frame = +3

Query: 24  SHWCHSCNSFVRV-QEDSVCCVDCGGGFVEEIXXXXXXXXXXXXXXXXXXXXXXXYSNMT 200
           S+WC+SCN FVRV   D++ C DC GGF+EEI                            
Sbjct: 2   SYWCYSCNRFVRVWSHDAIVCPDCDGGFLEEIEEQPRRPHRFPAAAMYMIENRP------ 55

Query: 201 VDSHAPEFNHAVGQSIADATSFRPLFYPFIVIRRT--------DETGTYEXXXXXXXXXX 356
              ++ + +H+  + I      R  F P IV+R T         + G ++          
Sbjct: 56  ---NSAQNSHSAVRRIRRGRGDRSPFNPVIVMRGTADEGGGEGGDRGAFDLYYDDGGGSG 112

Query: 357 XXXXAPGMSELIMGPGFDRILEHFIHFDMI---RVSHPPASKVAVDALPTIEINLGHVDS 527
                  +SE ++G GFDR+LE     ++    R   PPASK A++A+PTIEI   HV++
Sbjct: 113 LRPLPASVSEFLLGSGFDRLLEQLSQMEINGIGRYEQPPASKAAIEAMPTIEIADAHVNT 172

Query: 528 DTHCAVCTEPFEANTMARELPCKHLYHSDCILPWLEQRNSCPVCRHELPSEVADM--DGL 701
           + HCAVC EPFE    ARE+PCKH+YHSDCILPWL  RNSCPVCRHELPSE  +      
Sbjct: 173 EHHCAVCKEPFELGAEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPSEERNSPESNE 232

Query: 702 AAGEESMGLIIWRLPRGGYAVGRFNGGR 785
              EE++GL IWRLP GG+AVGRF+GGR
Sbjct: 233 QTPEETVGLTIWRLPGGGFAVGRFSGGR 260


>ref|XP_002269373.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 2 [Vitis
           vinifera]
          Length = 365

 Score =  205 bits (521), Expect = 1e-50
 Identities = 118/280 (42%), Positives = 152/280 (54%), Gaps = 25/280 (8%)
 Frame = +3

Query: 24  SHWCHSCNSFVRV-QEDSVCCVDCGGGFVEEIXXXXXXXXXXXXXXXXXXXXXXXYSNMT 200
           S WC+ CN F+RV  +D++ C DCG GFVE+I                         N  
Sbjct: 8   SFWCYRCNRFIRVWAQDAILCPDCGSGFVEQINNLSRSPRRRRLPGSAMYLENR---NAL 64

Query: 201 VDSHAPEFNHAVGQSIADATSFRPLFYPFIVIR------------RTDETGTYEXXXXXX 344
                P    A  +S  D    R LF P IV+R             + E G +E      
Sbjct: 65  DQDPVPRIRRA-RRSGGD----RSLFNPVIVLRGSADVNGSEGGGTSGERGNFELYYDDG 119

Query: 345 XXXXXXXXAPGMSELIMGPGFDRILEHFIHFDMI---RVSHPPASKVAVDALPTIEINLG 515
                      +SE +MG GFDR+L+     ++    R  HPPASK AV++LPTI+I   
Sbjct: 120 TGSGLRPLPASVSEFLMGSGFDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVAS 179

Query: 516 HVDSDTHCAVCTEPFEANTMARELPCKHLYHSDCILPWLEQRNSCPVCRHELPSEVADMD 695
           HV S++HCAVC EPFE ++ ARELPCKH+YHSDCILPWL  RNSCPVCRHELP++    +
Sbjct: 180 HVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNSCPVCRHELPTD--SHE 237

Query: 696 GLAAG---------EESMGLIIWRLPRGGYAVGRFNGGRE 788
           G ++G         E+++GL IWRLP GG+AVGRF GGR+
Sbjct: 238 GGSSGHLQSPGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQ 277


>emb|CAN82964.1| hypothetical protein VITISV_000345 [Vitis vinifera]
          Length = 364

 Score =  205 bits (521), Expect = 1e-50
 Identities = 118/280 (42%), Positives = 152/280 (54%), Gaps = 25/280 (8%)
 Frame = +3

Query: 24  SHWCHSCNSFVRV-QEDSVCCVDCGGGFVEEIXXXXXXXXXXXXXXXXXXXXXXXYSNMT 200
           S WC+ CN F+RV  +D++ C DCG GFVE+I                         N  
Sbjct: 7   SFWCYRCNRFIRVWAQDAILCPDCGSGFVEQINNLSRSPRRRRLPGSAMYLENR---NAL 63

Query: 201 VDSHAPEFNHAVGQSIADATSFRPLFYPFIVIR------------RTDETGTYEXXXXXX 344
                P    A  +S  D    R LF P IV+R             + E G +E      
Sbjct: 64  DQDPVPRIRRA-RRSGGD----RSLFNPVIVLRGSADVNGSEGGGTSGERGNFELYYDDG 118

Query: 345 XXXXXXXXAPGMSELIMGPGFDRILEHFIHFDMI---RVSHPPASKVAVDALPTIEINLG 515
                      +SE +MG GFDR+L+     ++    R  HPPASK AV++LPTI+I   
Sbjct: 119 TGSGLRPLPASVSEFLMGSGFDRLLDQLAQLEINGAGRCEHPPASKAAVESLPTIKIVAS 178

Query: 516 HVDSDTHCAVCTEPFEANTMARELPCKHLYHSDCILPWLEQRNSCPVCRHELPSEVADMD 695
           HV S++HCAVC EPFE ++ ARELPCKH+YHSDCILPWL  RNSCPVCRHELP++    +
Sbjct: 179 HVLSESHCAVCKEPFELDSEARELPCKHIYHSDCILPWLSLRNSCPVCRHELPTD--SHE 236

Query: 696 GLAAG---------EESMGLIIWRLPRGGYAVGRFNGGRE 788
           G ++G         E+++GL IWRLP GG+AVGRF GGR+
Sbjct: 237 GGSSGHLQSXGLTEEDNVGLTIWRLPGGGFAVGRFTGGRQ 276


>ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  204 bits (518), Expect = 2e-50
 Identities = 111/267 (41%), Positives = 141/267 (52%), Gaps = 13/267 (4%)
 Frame = +3

Query: 24  SHWCHSCNSFVRVQ-EDSVCCVDCGGGFVEEIXXXXXXXXXXXXXXXXXXXXXXXYSNMT 200
           S+WC+SC  FV +  + ++ C  C  GFVEEI                            
Sbjct: 11  SYWCYSCTRFVHLSVQSTIACPHCQSGFVEEIRAGAGAEASPRHRLSPFPDDPLLLRRQG 70

Query: 201 VDSHAPEFNHAVGQSIADATSFRPLFYPFIVIRRT---------DETGTYEXXXXXXXXX 353
                 E           A+  R  F P IV+R           D   T+E         
Sbjct: 71  FRRRRRE-----------ASGNRSPFNPVIVLRGPGDDSAAADHDGVSTFELFYDDGDGT 119

Query: 354 XXXXXAPGMSELIMGPGFDRILEHFIHFDMI---RVSHPPASKVAVDALPTIEINLGHVD 524
                 P MSEL++G GFDR+LE F   +M    R  +PPASK A++++PT+EI   HV+
Sbjct: 120 GLRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGETHVE 179

Query: 525 SDTHCAVCTEPFEANTMARELPCKHLYHSDCILPWLEQRNSCPVCRHELPSEVADMDGLA 704
           ++ HCAVC E FE +  ARELPCKH+YHSDCILPWL  RNSCPVCRHELPS++       
Sbjct: 180 TEAHCAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSDLETRVPSQ 239

Query: 705 AGEESMGLIIWRLPRGGYAVGRFNGGR 785
             EE++GL IWRLP GG+AVGRF+GGR
Sbjct: 240 IDEETIGLTIWRLPGGGFAVGRFSGGR 266


>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449527992|ref|XP_004170991.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 378

 Score =  203 bits (517), Expect = 3e-50
 Identities = 114/271 (42%), Positives = 149/271 (54%), Gaps = 17/271 (6%)
 Frame = +3

Query: 24  SHWCHSCNSFVRV-QEDSVCCVDCGGGFVEEIXXXXXXXXXXXXXXXXXXXXXXXYSNMT 200
           S+WC+ CN FVR   +DS+ C  C GGFVE I                           T
Sbjct: 7   SYWCYRCNRFVRAWAQDSITCPYCDGGFVEAIETASSLPPSNLHRRLSPSAIH------T 60

Query: 201 VDSHAPEFNHAVGQSIADATSFRPLFYPFIVIRRTDETG---------TYEXXXXXXXXX 353
           +D  + +      +        R  F P +V+R + + G         +++         
Sbjct: 61  LDQDSFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADAGDVVGGGERNSFDIYYDDGAGS 120

Query: 354 XXXXXAPGMSELIMGPGFDRILEHFIHFDMI---RVSHPPASKVAVDALPTIEINLGHVD 524
                   MSE +MG GFDR+LE     ++    R  +PPASK AV+++PTIEI   HVD
Sbjct: 121 GLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHVD 180

Query: 525 SDTHCAVCTEPFEANTMARELPCKHLYHSDCILPWLEQRNSCPVCRHELPSE-VADMDGL 701
           SD+HCAVC E FE  T ARE+PCKH+YHS+CI+PWL  RNSCPVCRHELPSE V+   G+
Sbjct: 181 SDSHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERVSPAGGV 240

Query: 702 A---AGEESMGLIIWRLPRGGYAVGRFNGGR 785
           +     EE++GL IWRLP GG+AVGRF+GGR
Sbjct: 241 SDRVVDEETVGLTIWRLPGGGFAVGRFSGGR 271


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