BLASTX nr result

ID: Cnidium21_contig00039469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039469
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis la...    62   5e-08
ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, pa...    62   5e-08
gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis la...    58   7e-07
ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vi...    58   7e-07
emb|CBI18506.3| unnamed protein product [Vitis vinifera]               56   3e-06

>gb|AGF69193.1| TMV resistance protein N-like protein 7 [Vitis labrusca]
          Length = 1335

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
 Frame = -3

Query: 326  QTIESLASTLLPQLRVD-PHRSLNLFLPGRRVPEWFTHKNAGDRLSLDLPQPWSFRKLKG 150
            Q + S+   L+P   +  PH   N  +PG R+PEWF H++ G  ++++LPQ W   KL G
Sbjct: 1081 QLMSSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYNTKLMG 1140

Query: 149  FATCAVF-----VPLNPNGSKGRLIEVSYCVQSLNDVFLCGTGIETRFFPNE 9
             A CA       +  NP         V Y    LND F+  TG+ + + P E
Sbjct: 1141 LAFCAALNFKGAMDGNPGTEPSSFGLVCY----LNDCFV-ETGLHSLYTPPE 1187


>ref|XP_003634610.1| PREDICTED: TMV resistance protein N-like, partial [Vitis vinifera]
          Length = 1274

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
 Frame = -3

Query: 326  QTIESLASTLLPQLRVD-PHRSLNLFLPGRRVPEWFTHKNAGDRLSLDLPQPWSFRKLKG 150
            Q + S+   L+P   +  PH   N  +PG R+PEWF H++ G  ++++LPQ W   KL G
Sbjct: 1010 QLMSSIPKFLVPDRGIPTPHNEYNALVPGNRIPEWFRHQSVGCSVNIELPQHWYNTKLMG 1069

Query: 149  FATCAVF-----VPLNPNGSKGRLIEVSYCVQSLNDVFLCGTGIETRFFPNE 9
             A CA       +  NP         V Y    LND F+  TG+ + + P E
Sbjct: 1070 LAFCAALNFKGAMDGNPGTEPSSFGLVCY----LNDCFV-ETGLHSLYTPPE 1116


>gb|AGF69192.1| TMV resistance protein N-like protein 6 [Vitis labrusca]
          Length = 1219

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
 Frame = -3

Query: 326  QTIESLASTLLPQLRVDPHRSLNLFLPGRRVPEWFTHKNAGDRLSLDLPQPWSFRKLKGF 147
            Q + S+   L+P     PH   N  +PG R+PEWF H++ G  ++++LP  W   KL G 
Sbjct: 1073 QLMSSIPKFLVPWGIPTPHNEYNALVPGSRIPEWFRHQSVGCSVNIELPPHWYNTKLMGL 1132

Query: 146  ATCAVFVPLN----PNGSKGRLIEVSYCVQSLNDVFLCGTGIETRFFPNE 9
            A CA    LN     +G  G        V  LND F+  TG+ + + P E
Sbjct: 1133 AFCAA---LNFKGAMDGYPGTEPSSFGLVCYLNDCFV-ETGLHSLYTPLE 1178


>ref|XP_003634612.1| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1162

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
 Frame = -3

Query: 326  QTIESLASTLLPQLRVDPHRSLNLFLPGRRVPEWFTHKNAGDRLSLDLPQPWSFRKLKGF 147
            Q + S+   L+P     PH   N  +PG R+PEWF H++ G  ++++LP  W   KL G 
Sbjct: 1016 QLMSSIPKFLVPWGIPTPHNEYNALVPGSRIPEWFRHQSVGCSVNIELPPHWYNTKLMGL 1075

Query: 146  ATCAVFVPLN----PNGSKGRLIEVSYCVQSLNDVFLCGTGIETRFFPNE 9
            A CA    LN     +G  G        V  LND F+  TG+ + + P E
Sbjct: 1076 AFCAA---LNFKGAMDGYPGTEPSSFGLVCYLNDCFV-ETGLHSLYTPLE 1121


>emb|CBI18506.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
 Frame = -3

Query: 335 AENQTIESLASTLLPQLRVD--PHRSLNLFLPGRRVPEWFTHKNAGDRLSLDLPQPWSFR 162
           AEN     +A  + P+++++  P    ++FLPG  +P+W +++N G  ++++LP  W   
Sbjct: 382 AENPCSNDMA-IISPRMQINFLPDFGFSIFLPGSEIPDWISNQNLGSEVTIELPPHWFES 440

Query: 161 KLKGFATCAVFV--PLNPNGSKGRLI 90
              GFA C VF    + PNG   +L+
Sbjct: 441 NFLGFAVCCVFAFEDIAPNGCSSQLL 466


Top