BLASTX nr result

ID: Cnidium21_contig00039468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039468
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...   179   2e-43
emb|CBI24510.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   179   2e-43
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...   177   8e-43
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   177   1e-42

>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1447

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/101 (85%), Positives = 93/101 (92%)
 Frame = -1

Query: 306 GRVSWKHHTCGISALSISTSLKQHPLIWSASNLPHEAYKLLAVPSPIGGVLVISTNTIHY 127
           GRVSWKHHTC ISALSIST+LKQHPLIWSA NLPH+AYKLLAVPSPIGGVLVIS NTIHY
Sbjct: 268 GRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVISANTIHY 327

Query: 126 HSQSASCVLALNNFAVAVDGSQETTRSSFSLELDAANATWL 4
           HSQSASC LALN++AV +D SQE  RSSF++ELDAANATWL
Sbjct: 328 HSQSASCALALNSYAVTLDSSQEIPRSSFNVELDAANATWL 368


>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/102 (84%), Positives = 93/102 (91%)
 Frame = -1

Query: 306 GRVSWKHHTCGISALSISTSLKQHPLIWSASNLPHEAYKLLAVPSPIGGVLVISTNTIHY 127
           GRVSWKHHTC ISALSIST+LKQHPLIWSA NLPH+AYKLL VPSPIGGV+VIS N+IHY
Sbjct: 272 GRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHY 331

Query: 126 HSQSASCVLALNNFAVAVDGSQETTRSSFSLELDAANATWLS 1
           HSQSASC LALNN+AV+ D SQE  RSSFS+ELDAANATWLS
Sbjct: 332 HSQSASCALALNNYAVSADNSQEMPRSSFSVELDAANATWLS 373


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Vitis vinifera]
          Length = 1442

 Score =  179 bits (454), Expect = 2e-43
 Identities = 86/102 (84%), Positives = 93/102 (91%)
 Frame = -1

Query: 306 GRVSWKHHTCGISALSISTSLKQHPLIWSASNLPHEAYKLLAVPSPIGGVLVISTNTIHY 127
           GRVSWKHHTC ISALSIST+LKQHPLIWSA NLPH+AYKLL VPSPIGGV+VIS N+IHY
Sbjct: 272 GRVSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLPVPSPIGGVVVISANSIHY 331

Query: 126 HSQSASCVLALNNFAVAVDGSQETTRSSFSLELDAANATWLS 1
           HSQSASC LALNN+AV+ D SQE  RSSFS+ELDAANATWLS
Sbjct: 332 HSQSASCALALNNYAVSADNSQEMPRSSFSVELDAANATWLS 373


>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1449

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/101 (84%), Positives = 91/101 (90%)
 Frame = -1

Query: 306 GRVSWKHHTCGISALSISTSLKQHPLIWSASNLPHEAYKLLAVPSPIGGVLVISTNTIHY 127
           GRVSW HHTC ISALSIST+LKQHPLIWSA NLPH+AYKLLAVPSPIGGVLVI  NTIHY
Sbjct: 270 GRVSWTHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVIGANTIHY 329

Query: 126 HSQSASCVLALNNFAVAVDGSQETTRSSFSLELDAANATWL 4
           HSQSASC LALNN+AV +D SQE  RSSF++ELDAANATWL
Sbjct: 330 HSQSASCALALNNYAVTLDSSQEIPRSSFNVELDAANATWL 370


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 1504

 Score =  177 bits (448), Expect = 1e-42
 Identities = 83/101 (82%), Positives = 95/101 (94%)
 Frame = -1

Query: 306 GRVSWKHHTCGISALSISTSLKQHPLIWSASNLPHEAYKLLAVPSPIGGVLVISTNTIHY 127
           GRVSWKHHTC +SALSIST+LKQHPLIWSASNLPH+AYKLLAVPSPIGGVLVIS N+IHY
Sbjct: 271 GRVSWKHHTCMVSALSISTTLKQHPLIWSASNLPHDAYKLLAVPSPIGGVLVISANSIHY 330

Query: 126 HSQSASCVLALNNFAVAVDGSQETTRSSFSLELDAANATWL 4
           +SQSASC+LALNN+AV+ D SQ+  RS+F++ELDAANATWL
Sbjct: 331 NSQSASCMLALNNYAVSADSSQDMPRSNFNVELDAANATWL 371


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