BLASTX nr result

ID: Cnidium21_contig00039420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039420
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531955.1| conserved hypothetical protein [Ricinus comm...   153   1e-35
ref|XP_003609405.1| CCR4-NOT transcription complex subunit 10-B ...   152   3e-35
emb|CBI28248.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...   152   3e-35
emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]   152   3e-35

>ref|XP_002531955.1| conserved hypothetical protein [Ricinus communis]
           gi|223528401|gb|EEF30437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 851

 Score =  153 bits (387), Expect = 1e-35
 Identities = 83/141 (58%), Positives = 102/141 (72%)
 Frame = +2

Query: 23  SNNISRTHNDDTFPVIDLRLKLHLYKVSFXXXXXXXXXXXXEVKMAMNIARGKDYSMALF 202
           +N++SR   D T   IDL+LKL LYKV F            EVK+AMNIARG+D S AL 
Sbjct: 321 ANDLSRAQVDRTMSSIDLKLKLQLYKVRFLLLTRNLKQAKREVKLAMNIARGRDSSTALL 380

Query: 203 LKSQLEYARGNYSKSVKLLMASSNRTELETFVMYYNNLGCIYYRLGKHQTSAVFFCKALK 382
           LK+QLEYARGN+ K++KLLMASSNRTE+    M +NNLGCIY++LGK+ +S+V F KAL 
Sbjct: 381 LKAQLEYARGNHRKAIKLLMASSNRTEMGVSSM-FNNLGCIYFQLGKYHSSSVLFSKALT 439

Query: 383 SSSLLWKEKPLTPSTYSQDKS 445
           SSS L K+KPL   T+SQDKS
Sbjct: 440 SSSSLRKDKPLKMLTFSQDKS 460


>ref|XP_003609405.1| CCR4-NOT transcription complex subunit 10-B [Medicago truncatula]
           gi|355510460|gb|AES91602.1| CCR4-NOT transcription
           complex subunit 10-B [Medicago truncatula]
          Length = 881

 Score =  152 bits (384), Expect = 3e-35
 Identities = 85/148 (57%), Positives = 105/148 (70%)
 Frame = +2

Query: 2   TKKSVQFSNNISRTHNDDTFPVIDLRLKLHLYKVSFXXXXXXXXXXXXEVKMAMNIARGK 181
           T+ +V  SN +SRT  D  F  +DL+LKL L KV F            EVK+AMNIARG+
Sbjct: 297 TRPTVPPSNYLSRTLVD-RFSTLDLKLKLQLCKVQFLILTRNLKIAKREVKLAMNIARGR 355

Query: 182 DYSMALFLKSQLEYARGNYSKSVKLLMASSNRTELETFVMYYNNLGCIYYRLGKHQTSAV 361
           D SMAL LKSQLEYARGN+ K++KLLMASSNRT+ E   ++ NNLGCIYY+LGK+QTS+ 
Sbjct: 356 DSSMALILKSQLEYARGNHRKAIKLLMASSNRTDTEFSSIFNNNLGCIYYQLGKYQTSSF 415

Query: 362 FFCKALKSSSLLWKEKPLTPSTYSQDKS 445
           FF KAL + S L KE+    +T+SQDKS
Sbjct: 416 FFSKALTNCSSLRKEQQKKLATFSQDKS 443


>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/140 (56%), Positives = 99/140 (70%)
 Frame = +2

Query: 26  NNISRTHNDDTFPVIDLRLKLHLYKVSFXXXXXXXXXXXXEVKMAMNIARGKDYSMALFL 205
           N++SR   D + P +DL+LKL LYKV              EVK AMNIARG+D SMAL L
Sbjct: 286 NDLSRAPADRSIPTVDLKLKLQLYKVRILLLTRNLKAAKREVKQAMNIARGRDSSMALLL 345

Query: 206 KSQLEYARGNYSKSVKLLMASSNRTELETFVMYYNNLGCIYYRLGKHQTSAVFFCKALKS 385
           KS+LEYARGN+ K++KLLMASSN++E+    ++ NNLGCI+Y+LGKH TS +FF KAL  
Sbjct: 346 KSELEYARGNHRKAIKLLMASSNQSEMGISSIFNNNLGCIHYQLGKHHTSTIFFSKALSG 405

Query: 386 SSLLWKEKPLTPSTYSQDKS 445
           SS L KEK    S++SQDKS
Sbjct: 406 SSSLKKEKTPKLSSFSQDKS 425


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
           vinifera]
          Length = 857

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/140 (56%), Positives = 99/140 (70%)
 Frame = +2

Query: 26  NNISRTHNDDTFPVIDLRLKLHLYKVSFXXXXXXXXXXXXEVKMAMNIARGKDYSMALFL 205
           N++SR   D + P +DL+LKL LYKV              EVK AMNIARG+D SMAL L
Sbjct: 303 NDLSRAPADRSIPTVDLKLKLQLYKVRILLLTRNLKAAKREVKQAMNIARGRDSSMALLL 362

Query: 206 KSQLEYARGNYSKSVKLLMASSNRTELETFVMYYNNLGCIYYRLGKHQTSAVFFCKALKS 385
           KS+LEYARGN+ K++KLLMASSN++E+    ++ NNLGCI+Y+LGKH TS +FF KAL  
Sbjct: 363 KSELEYARGNHRKAIKLLMASSNQSEMGISSIFNNNLGCIHYQLGKHHTSTIFFSKALSG 422

Query: 386 SSLLWKEKPLTPSTYSQDKS 445
           SS L KEK    S++SQDKS
Sbjct: 423 SSSLKKEKTPKLSSFSQDKS 442


>emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]
          Length = 701

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/140 (56%), Positives = 99/140 (70%)
 Frame = +2

Query: 26  NNISRTHNDDTFPVIDLRLKLHLYKVSFXXXXXXXXXXXXEVKMAMNIARGKDYSMALFL 205
           N++SR   D + P +DL+LKL LYKV              EVK AMNIARG+D SMAL L
Sbjct: 147 NDLSRAPADRSIPTVDLKLKLQLYKVRILLLTRNLKAAKREVKQAMNIARGRDSSMALLL 206

Query: 206 KSQLEYARGNYSKSVKLLMASSNRTELETFVMYYNNLGCIYYRLGKHQTSAVFFCKALKS 385
           KS+LEYARGN+ K++KLLMASSN++E+    ++ NNLGCI+Y+LGKH TS +FF KAL  
Sbjct: 207 KSELEYARGNHRKAIKLLMASSNQSEMGISSIFNNNLGCIHYQLGKHHTSTIFFSKALSG 266

Query: 386 SSLLWKEKPLTPSTYSQDKS 445
           SS L KEK    S++SQDKS
Sbjct: 267 SSSLKKEKTPKLSSFSQDKS 286


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