BLASTX nr result

ID: Cnidium21_contig00039377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039377
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273322.1| PREDICTED: nucleolar protein 14-like [Vitis ...   107   8e-22
ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
gb|ACG60683.1| unknown protein [Brassica oleracea var. alboglabra]    103   1e-20
ref|XP_003590488.1| Nucleolar protein [Medicago truncatula] gi|3...   103   2e-20
emb|CBI27323.3| unnamed protein product [Vitis vinifera]              103   2e-20

>ref|XP_002273322.1| PREDICTED: nucleolar protein 14-like [Vitis vinifera]
          Length = 973

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/71 (74%), Positives = 63/71 (88%)
 Frame = -1

Query: 213 PDSIAMKKVKATKLNPFETIWSRRKFDVLGKKRKGEERRLGLARSLAIQKRTKTLLKDYE 34
           P+S+AMK +KA + NPFETIWSR KFD+LGKKRKGE++R+GLARS AIQKR  TLLK+YE
Sbjct: 27  PNSVAMK-LKAPQSNPFETIWSRTKFDILGKKRKGEQKRIGLARSRAIQKRNATLLKEYE 85

Query: 33  QSGKSSVFVDK 1
           QS KSSVF+DK
Sbjct: 86  QSAKSSVFLDK 96


>ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|222865054|gb|EEF02185.1|
           predicted protein [Populus trichocarpa]
          Length = 620

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/76 (69%), Positives = 63/76 (82%), Gaps = 5/76 (6%)
 Frame = -1

Query: 213 PDSIAMKKVKATK-----LNPFETIWSRRKFDVLGKKRKGEERRLGLARSLAIQKRTKTL 49
           P+S+AMK   A+K      NPFETIWSRRKFD+LGKKRKGEE R+GL+R  AI+KR KTL
Sbjct: 29  PNSVAMKASAASKDNKNSSNPFETIWSRRKFDILGKKRKGEELRIGLSRCRAIEKRKKTL 88

Query: 48  LKDYEQSGKSSVFVDK 1
           LK+YE+SGKSSVF+DK
Sbjct: 89  LKEYEESGKSSVFLDK 104


>gb|ACG60683.1| unknown protein [Brassica oleracea var. alboglabra]
          Length = 879

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/71 (71%), Positives = 59/71 (83%)
 Frame = -1

Query: 213 PDSIAMKKVKATKLNPFETIWSRRKFDVLGKKRKGEERRLGLARSLAIQKRTKTLLKDYE 34
           PD++AMK       NPFE+IWSRRKFDVLGKKRKGEERR+GL+RS A+ KR  TLLK+YE
Sbjct: 22  PDAVAMKAKAKKADNPFESIWSRRKFDVLGKKRKGEERRVGLSRSRAVDKRKNTLLKEYE 81

Query: 33  QSGKSSVFVDK 1
           QS KSSVF+DK
Sbjct: 82  QSLKSSVFMDK 92


>ref|XP_003590488.1| Nucleolar protein [Medicago truncatula] gi|355479536|gb|AES60739.1|
           Nucleolar protein [Medicago truncatula]
          Length = 137

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/72 (68%), Positives = 63/72 (87%), Gaps = 1/72 (1%)
 Frame = -1

Query: 213 PDSIAMK-KVKATKLNPFETIWSRRKFDVLGKKRKGEERRLGLARSLAIQKRTKTLLKDY 37
           P+++AMK K + T  NPFE+IWSRRKFDV+G+KRKG+ +R+GLARSLAI+KR KTLLK+Y
Sbjct: 30  PEAVAMKAKAQKTNSNPFESIWSRRKFDVMGQKRKGDTKRMGLARSLAIEKRKKTLLKEY 89

Query: 36  EQSGKSSVFVDK 1
           EQS KSS F+D+
Sbjct: 90  EQSTKSSEFIDR 101


>emb|CBI27323.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/64 (76%), Positives = 57/64 (89%)
 Frame = -1

Query: 192 KVKATKLNPFETIWSRRKFDVLGKKRKGEERRLGLARSLAIQKRTKTLLKDYEQSGKSSV 13
           K+KA + NPFETIWSR KFD+LGKKRKGE++R+GLARS AIQKR  TLLK+YEQS KSSV
Sbjct: 2   KLKAPQSNPFETIWSRTKFDILGKKRKGEQKRIGLARSRAIQKRNATLLKEYEQSAKSSV 61

Query: 12  FVDK 1
           F+DK
Sbjct: 62  FLDK 65


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