BLASTX nr result

ID: Cnidium21_contig00039354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039354
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299159.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_004135888.1| PREDICTED: tubby-like protein 8-like [Cucumi...    63   3e-08

>ref|XP_002299159.1| predicted protein [Populus trichocarpa] gi|222846417|gb|EEE83964.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
 Frame = +1

Query: 4   KHNRSFSEGCRGNSDIVPLGVHIRRGSDKKENVVAPNKVGNVDKENAEPNSGPLAVTN-- 177
           KH+ + SEG     D++      +  +D KEN+    K G VDKENA PN+     TN  
Sbjct: 27  KHHHTCSEG-----DLLT-----KSFTDNKENIDNTAKFGGVDKENAVPNNSKPLSTNGS 76

Query: 178 -------KVSTDKFHKKPRALKPTSLQLCMQMNEPDFLLGSGSMDPVDSEHS 312
                  ++S  K     R LKP+SLQLCMQMNEP+ +  S   D  +SE S
Sbjct: 77  LSVLPKPQLSNMKSLSTGRVLKPSSLQLCMQMNEPEKVFKSKIWDSAESEKS 128


>ref|XP_004135888.1| PREDICTED: tubby-like protein 8-like [Cucumis sativus]
           gi|449509158|ref|XP_004163512.1| PREDICTED: tubby-like
           protein 8-like [Cucumis sativus]
          Length = 408

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = +1

Query: 1   LKHNRSFSEGC---RGNSDIVPLGVHIRRGSDKKENVVAPNKVGNVDKENAEPNSGPLAV 171
           L+HNRS S+G    +G  ++ P         DK+ +  AP  +   DKEN  P +G  A 
Sbjct: 26  LRHNRSCSDGGGFRQGKENLTP------NTKDKQRDEPAPAVL--CDKENVIPANGFCAN 77

Query: 172 TNKVSTD-KFHKKPRALKPTSLQLCMQMNEPDFLLGSGSMDPVDSEHS 312
           + +   D K     +ALKP+SL LCMQMNEPD +  S   D  DSEHS
Sbjct: 78  SKQQFGDFKSFSNGKALKPSSLHLCMQMNEPDKVFASRLWDGTDSEHS 125


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