BLASTX nr result

ID: Cnidium21_contig00039325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039325
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD25944.1|AF085279_17 hypothetical EIF-2-Alpha [Arabidopsis ...    65   2e-20
ref|XP_002881712.1| hypothetical protein ARALYDRAFT_483081 [Arab...    65   2e-20
ref|XP_002531243.1| eukaryotic translation initiation factor, pu...    65   2e-20
ref|NP_565927.1| Eukaryotic translation initiation factor 2 subu...    65   2e-20
ref|NP_973648.1| Eukaryotic translation initiation factor 2 subu...    65   2e-20

>gb|AAD25944.1|AF085279_17 hypothetical EIF-2-Alpha [Arabidopsis thaliana]
          Length = 370

 Score = 65.5 bits (158), Expect(2) = 2e-20
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 RIRSVGSLIKVGRIEPAMVIRVNPDKGYIDLSKKRLSEQD 3
           RIRSV SLIKVGRIEP MV+RV+ +KGYIDLSK+R+SE+D
Sbjct: 59  RIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEED 98



 Score = 58.5 bits (140), Expect(2) = 2e-20
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 340 TTTLDCRMYQSKYPKVDTPVMIQVKEIGGVSARVSLLEYNN 218
           T  L+CRMY++KYP+VD  VMIQVK I  + A VSLLEYNN
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNN 45


>ref|XP_002881712.1| hypothetical protein ARALYDRAFT_483081 [Arabidopsis lyrata subsp.
           lyrata] gi|297327551|gb|EFH57971.1| hypothetical protein
           ARALYDRAFT_483081 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score = 65.5 bits (158), Expect(2) = 2e-20
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 RIRSVGSLIKVGRIEPAMVIRVNPDKGYIDLSKKRLSEQD 3
           RIRSV SLIKVGRIEP MV+RV+ +KGYIDLSK+R+SE+D
Sbjct: 59  RIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEED 98



 Score = 58.5 bits (140), Expect(2) = 2e-20
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 340 TTTLDCRMYQSKYPKVDTPVMIQVKEIGGVSARVSLLEYNN 218
           T  L+CRMY++KYP+VD  VMIQVK I  + A VSLLEYNN
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNN 45


>ref|XP_002531243.1| eukaryotic translation initiation factor, putative [Ricinus
           communis] gi|223529162|gb|EEF31140.1| eukaryotic
           translation initiation factor, putative [Ricinus
           communis]
          Length = 344

 Score = 65.5 bits (158), Expect(2) = 2e-20
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 RIRSVGSLIKVGRIEPAMVIRVNPDKGYIDLSKKRLSEQD 3
           RIRSV SLIKVGRIEP MV+RV+ +KGYIDLSK+R+SE+D
Sbjct: 59  RIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEED 98



 Score = 58.5 bits (140), Expect(2) = 2e-20
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 340 TTTLDCRMYQSKYPKVDTPVMIQVKEIGGVSARVSLLEYNN 218
           T  L+CRMY++KYP+VD  VMIQVK I  + A VSLLEYNN
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNN 45


>ref|NP_565927.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|19347786|gb|AAL86344.1| putative eukaryotic
           translation initiation factor 2 alpha subunit eIF2
           [Arabidopsis thaliana] gi|20198018|gb|AAD25664.2|
           putative eukaryotic translation initiation factor 2
           alpha subunit, eIF2 [Arabidopsis thaliana]
           gi|21436249|gb|AAM51263.1| putative eukaryotic
           translation initiation factor 2 alpha subunit eIF2
           [Arabidopsis thaliana] gi|330254713|gb|AEC09807.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana]
          Length = 344

 Score = 65.5 bits (158), Expect(2) = 2e-20
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 RIRSVGSLIKVGRIEPAMVIRVNPDKGYIDLSKKRLSEQD 3
           RIRSV SLIKVGRIEP MV+RV+ +KGYIDLSK+R+SE+D
Sbjct: 59  RIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEED 98



 Score = 58.5 bits (140), Expect(2) = 2e-20
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 340 TTTLDCRMYQSKYPKVDTPVMIQVKEIGGVSARVSLLEYNN 218
           T  L+CRMY++KYP+VD  VMIQVK I  + A VSLLEYNN
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNN 45


>ref|NP_973648.1| Eukaryotic translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|79324819|ref|NP_001031518.1| Eukaryotic
           translation initiation factor 2 subunit 1 [Arabidopsis
           thaliana] gi|124300956|gb|ABN04730.1| At2g40290
           [Arabidopsis thaliana] gi|330254714|gb|AEC09808.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana] gi|330254715|gb|AEC09809.1|
           Eukaryotic translation initiation factor 2 subunit 1
           [Arabidopsis thaliana]
          Length = 241

 Score = 65.5 bits (158), Expect(2) = 2e-20
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -3

Query: 122 RIRSVGSLIKVGRIEPAMVIRVNPDKGYIDLSKKRLSEQD 3
           RIRSV SLIKVGRIEP MV+RV+ +KGYIDLSK+R+SE+D
Sbjct: 59  RIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEED 98



 Score = 58.5 bits (140), Expect(2) = 2e-20
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 340 TTTLDCRMYQSKYPKVDTPVMIQVKEIGGVSARVSLLEYNN 218
           T  L+CRMY++KYP+VD  VMIQVK I  + A VSLLEYNN
Sbjct: 5   TPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNN 45


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