BLASTX nr result

ID: Cnidium21_contig00039307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039307
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161789.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-lik...   115   3e-24
ref|XP_004146329.1| PREDICTED: villin-4-like [Cucumis sativus]        115   3e-24
ref|XP_003594974.1| Villin-4 [Medicago truncatula] gi|355484022|...   115   3e-24
ref|XP_003533726.1| PREDICTED: villin-4-like [Glycine max]            112   4e-23
ref|XP_003546420.1| PREDICTED: villin-4-like isoform 1 [Glycine ...   111   5e-23

>ref|XP_004161789.1| PREDICTED: LOW QUALITY PROTEIN: villin-4-like [Cucumis sativus]
          Length = 959

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = +1

Query: 4    LDKPKRR-PAILGGRSAASPEKAQXXXXXXXXXXXXXXXXXGRSPAFNALAAQFEKPNGR 180
            +DKPKRR P I GGRS++ PEK+Q                 GRSPAFNALAA FE PN R
Sbjct: 745  VDKPKRRAPVIYGGRSSSVPEKSQRSRSVSFSPDRVRVR--GRSPAFNALAANFENPNAR 802

Query: 181  NLSTPPPDVKKLYPKPAPSDSTKVISKSMAIAALKSNFEK--PAKTILIPRSIKG 339
            NLSTPPP V+KLYPK    DS+++ SK+ AIAAL ++FE+  PA+ ++IPRS++G
Sbjct: 803  NLSTPPPMVRKLYPKSVTPDSSRLASKNAAIAALSASFEQPLPAREVIIPRSLRG 857


>ref|XP_004146329.1| PREDICTED: villin-4-like [Cucumis sativus]
          Length = 962

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/115 (54%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
 Frame = +1

Query: 4    LDKPKRR-PAILGGRSAASPEKAQXXXXXXXXXXXXXXXXXGRSPAFNALAAQFEKPNGR 180
            +DKPKRR P I GGRS++ PEK+Q                 GRSPAFNALAA FE PN R
Sbjct: 745  VDKPKRRAPVIYGGRSSSVPEKSQRSRSVSFSPDRVRVR--GRSPAFNALAANFENPNAR 802

Query: 181  NLSTPPPDVKKLYPKPAPSDSTKVISKSMAIAALKSNFEK--PAKTILIPRSIKG 339
            NLSTPPP V+KLYPK    DS+++ SK+ AIAAL ++FE+  PA+ ++IPRS++G
Sbjct: 803  NLSTPPPMVRKLYPKSVTPDSSRLASKNAAIAALSASFEQPLPAREVIIPRSLRG 857


>ref|XP_003594974.1| Villin-4 [Medicago truncatula] gi|355484022|gb|AES65225.1| Villin-4
            [Medicago truncatula]
          Length = 981

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/113 (54%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
 Frame = +1

Query: 4    LDKPKRRPAILGGRSAASPEKAQXXXXXXXXXXXXXXXXXGRSPAFNALAAQFEKPNGRN 183
            LDKPKRR    GGRS++ P+K+Q                 GRSPAFNALAA FE P GRN
Sbjct: 764  LDKPKRRTPTYGGRSSSVPDKSQQRSSRSMSVSPDRVRVRGRSPAFNALAATFESPGGRN 823

Query: 184  LSTPPPDVKKLYPKPAPSDSTKVISKSMAIAALKSNFEKP--AKTILIPRSIK 336
            LSTPPP ++KLYPK    DS  + SKS AIAAL S+FE+P  A+  +IPRS+K
Sbjct: 824  LSTPPPVIRKLYPKSTTPDSAILASKSKAIAALTSSFEQPPSARETMIPRSVK 876


>ref|XP_003533726.1| PREDICTED: villin-4-like [Glycine max]
          Length = 960

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
 Frame = +1

Query: 1    ILDKPKRRP-AILGGRSAASPEKAQXXXXXXXXXXXXXXXXXGRSPAFNALAAQFEKPNG 177
            +LDKPKRR  A  GGRS++ P+K+                  GRSPAFNALAA FE PN 
Sbjct: 744  VLDKPKRRTSASYGGRSSSVPDKSSQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNS 803

Query: 178  RNLSTPPPDVKKLYPKPAPSDSTKVISKSMAIAALKSNFEKP--AKTILIPRSIKGM 342
            RNLSTPPP ++KLYPK   +DS  +  KS AIAAL S+FE+P  A+  +IPRS+K M
Sbjct: 804  RNLSTPPPVIRKLYPKSVTTDSAILAPKSSAIAALSSSFEQPPSARETMIPRSLKVM 860


>ref|XP_003546420.1| PREDICTED: villin-4-like isoform 1 [Glycine max]
            gi|356556214|ref|XP_003546421.1| PREDICTED: villin-4-like
            isoform 2 [Glycine max]
          Length = 963

 Score =  111 bits (278), Expect = 5e-23
 Identities = 61/115 (53%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
 Frame = +1

Query: 1    ILDKPKRR-PAILGGRSAASPEKAQXXXXXXXXXXXXXXXXXGRSPAFNALAAQFEKPNG 177
            +LDKPKRR P   GGRS++ P+K+                  GRSPAFNALAA FE PN 
Sbjct: 744  VLDKPKRRTPVSYGGRSSSVPDKSSQRSSRSMSVSPDRVRVRGRSPAFNALAANFENPNA 803

Query: 178  RNLSTPPPDVKKLYPKPAPSDSTKVISKSMAIAALKSNFEKP--AKTILIPRSIK 336
            RNLSTPPP ++KLYPK    DS  +  KS AIAAL S+FE+P  A+  +IP+SIK
Sbjct: 804  RNLSTPPPVIRKLYPKSVTPDSAILAPKSAAIAALSSSFEQPPSARETMIPKSIK 858


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