BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039304
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|2...   209   3e-52
ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
emb|CBI27289.3| unnamed protein product [Vitis vinifera]              201   9e-50
ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containi...   201   9e-50
ref|XP_002512079.1| pentatricopeptide repeat-containing protein,...   196   4e-48

>ref|XP_002311339.1| predicted protein [Populus trichocarpa] gi|222851159|gb|EEE88706.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  209 bits (533), Expect = 3e-52
 Identities = 112/208 (53%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
 Frame = -3

Query: 620 MWRRGF--IAARKFSSSSEIPALYSFLQPSIFALKRXXXXXXXXXXXXDQNPCRTLSQDS 447
           M RR F  +  R FS++ EIP LYSFLQP+IFALK+            ++   + L+QD 
Sbjct: 1   MLRRVFPLLRRRSFSTTPEIPNLYSFLQPTIFALKKTPPSTTNPATTTNRQTPKILTQDH 60

Query: 446 QATLEXXXXXXXXXXXTDEAWKSFKTLTNGSAYPSKVLTNSLITHLCLISDTHNLKRAFA 267
              LE           T+EAW SFK+LT+ SA+PSK LTNSLITHL  ++DT NLKRAFA
Sbjct: 61  ITNLESTLHKSLITNNTNEAWASFKSLTSNSAFPSKSLTNSLITHLSSLNDTINLKRAFA 120

Query: 266 STVFFLEKNPRLLDSQSVETLLNSMKVANTAAPAFELVKCMFKNRYFVPCKVWSNVLIDI 87
           S V+ +EKNP+ LD ++V+  L SM  ANTAAPAF L+KCMFKNR+F+P ++W ++LI+I
Sbjct: 121 SIVYVIEKNPKSLDFETVQLFLGSMVRANTAAPAFALIKCMFKNRFFMPFRLWGDILIEI 180

Query: 86  SRKNGSFKAFVKVFNENCRIAKEEKLDF 3
           SRKN    AF+KVF E+CRIA +EKLDF
Sbjct: 181 SRKNDKVIAFLKVFEESCRIAIDEKLDF 208


>ref|XP_004135146.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
           gi|449517162|ref|XP_004165615.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g69290-like [Cucumis sativus]
          Length = 656

 Score =  207 bits (526), Expect = 2e-51
 Identities = 117/210 (55%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
 Frame = -3

Query: 620 MWRRGF--IAARKFSSSSEIP-ALYSFLQPSIFALKRXXXXXXXXXXXXDQNPC-RTLSQ 453
           MW+R    I  R FSS  E P +LYSFLQPS+FA KR             Q+P  + L+ 
Sbjct: 1   MWKRVLCLIPHRSFSSVPENPPSLYSFLQPSLFARKRTPFSPSQDSTDLRQDPTPQNLTP 60

Query: 452 DSQATLEXXXXXXXXXXXTDEAWKSFKTLTNGSAYPSKVLTNSLITHLCLISDTHNLKRA 273
           D  A +E           TDEAWKSFK LT  SA+PSK LTNSLI HL  I D HNLKRA
Sbjct: 61  DGVAVVETALHKSLLTSDTDEAWKSFKLLTRSSAFPSKSLTNSLIAHLSSIGDVHNLKRA 120

Query: 272 FASTVFFLEKNPRLLDSQSVETLLNSMKVANTAAPAFELVKCMFKNRYFVPCKVWSNVLI 93
           FAS VF +EK P LLD  SV+ LL SMK ANTAAPA  L+KCMFKNR FVP  VW   L+
Sbjct: 121 FASVVFVIEKKPELLDFGSVKALLASMKCANTAAPALSLIKCMFKNRCFVPFSVWGKELV 180

Query: 92  DISRKNGSFKAFVKVFNENCRIAKEEKLDF 3
           DI R++GS   F++VF ENCRIA +E+LDF
Sbjct: 181 DICRQSGSLIPFLRVFEENCRIALDERLDF 210


>emb|CBI27289.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  201 bits (511), Expect = 9e-50
 Identities = 111/211 (52%), Positives = 133/211 (63%), Gaps = 6/211 (2%)
 Frame = -3

Query: 620 MWRRG----FIAARKFSSSSE--IPALYSFLQPSIFALKRXXXXXXXXXXXXDQNPCRTL 459
           MWRR     F   R+FSS+SE   P LYSFLQPS+F+LK                  + L
Sbjct: 1   MWRRAVAVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLKPIPSAPRSPHPTSP----KPL 56

Query: 458 SQDSQATLEXXXXXXXXXXXTDEAWKSFKTLTNGSAYPSKVLTNSLITHLCLISDTHNLK 279
              +   LE           TDEAWKSFK LT  S +PSK L NSLI HL  + D +NLK
Sbjct: 57  QSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYNLK 116

Query: 278 RAFASTVFFLEKNPRLLDSQSVETLLNSMKVANTAAPAFELVKCMFKNRYFVPCKVWSNV 99
           RAFAS VF LEKNP LLD  +V TLL SM  ANTAAPAF L+ CMFKNRYF+P  +W  V
Sbjct: 117 RAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWGGV 176

Query: 98  LIDISRKNGSFKAFVKVFNENCRIAKEEKLD 6
           +++I+R+N SF AF++VFNE CRIA +EKL+
Sbjct: 177 IVEITRRNRSFVAFLRVFNETCRIAIDEKLE 207


>ref|XP_002274151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g69290
           [Vitis vinifera]
          Length = 655

 Score =  201 bits (511), Expect = 9e-50
 Identities = 111/211 (52%), Positives = 133/211 (63%), Gaps = 6/211 (2%)
 Frame = -3

Query: 620 MWRRG----FIAARKFSSSSE--IPALYSFLQPSIFALKRXXXXXXXXXXXXDQNPCRTL 459
           MWRR     F   R+FSS+SE   P LYSFLQPS+F+LK                  + L
Sbjct: 1   MWRRAVAVRFAPQRRFSSTSESEFPTLYSFLQPSLFSLKPIPSAPRSPHPTSP----KPL 56

Query: 458 SQDSQATLEXXXXXXXXXXXTDEAWKSFKTLTNGSAYPSKVLTNSLITHLCLISDTHNLK 279
              +   LE           TDEAWKSFK LT  S +PSK L NSLI HL  + D +NLK
Sbjct: 57  QSPAPEDLESALHTSLSTNNTDEAWKSFKALTTNSTFPSKSLANSLIAHLASLHDLYNLK 116

Query: 278 RAFASTVFFLEKNPRLLDSQSVETLLNSMKVANTAAPAFELVKCMFKNRYFVPCKVWSNV 99
           RAFAS VF LEKNP LLD  +V TLL SM  ANTAAPAF L+ CMFKNRYF+P  +W  V
Sbjct: 117 RAFASAVFLLEKNPSLLDFGTVRTLLGSMNSANTAAPAFALINCMFKNRYFMPFSMWGGV 176

Query: 98  LIDISRKNGSFKAFVKVFNENCRIAKEEKLD 6
           +++I+R+N SF AF++VFNE CRIA +EKL+
Sbjct: 177 IVEITRRNRSFVAFLRVFNETCRIAIDEKLE 207


>ref|XP_002512079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549259|gb|EEF50748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 650

 Score =  196 bits (497), Expect = 4e-48
 Identities = 111/210 (52%), Positives = 141/210 (67%), Gaps = 4/210 (1%)
 Frame = -3

Query: 620 MWRR---GFIAARKFSSSSEIPALYSFLQPSIFALKRXXXXXXXXXXXXDQNPCRTLSQD 450
           MWRR    F+  R FS+S+    LYSFLQP+IF LK+                 ++L+ D
Sbjct: 1   MWRRKAINFLPNRTFSTST----LYSFLQPTIFTLKKPTTDPTNTTPPPT---LQSLNLD 53

Query: 449 SQATLEXXXXXXXXXXXTDEAWKSFKTLTNGSAY-PSKVLTNSLITHLCLISDTHNLKRA 273
             ATLE           TD+AWKSFK LT+ S+Y PSK L NSLITHL  + DT NLKRA
Sbjct: 54  HVATLESTIHNSLLTNDTDQAWKSFKFLTSNSSYFPSKSLANSLITHLSSLQDTLNLKRA 113

Query: 272 FASTVFFLEKNPRLLDSQSVETLLNSMKVANTAAPAFELVKCMFKNRYFVPCKVWSNVLI 93
           FAS +FF+EKNP+ LD ++V+++L SMK AN+AAPAF LVKCMFK+RYF+P  +W  ++ 
Sbjct: 114 FASVIFFMEKNPQSLDFETVQSVLESMKFANSAAPAFALVKCMFKHRYFMPFHLWGGLIG 173

Query: 92  DISRKNGSFKAFVKVFNENCRIAKEEKLDF 3
            IS+KNG F AF+KVF E+ RIA +EKLDF
Sbjct: 174 HISKKNGMFVAFLKVFEESYRIAVDEKLDF 203