BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039298
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...   101   9e-20
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    93   3e-17
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    93   3e-17
gb|ABN08583.1| Polynucleotidyl transferase, Ribonuclease H fold ...    91   2e-16
ref|XP_003615225.1| hypothetical protein MTR_5g065390 [Medicago ...    86   7e-15

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score =  101 bits (252), Expect = 9e-20
 Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 2/182 (1%)
 Frame = +2

Query: 77  VLWGIWFFRNKKVWENKSITHVTAMDMSAKMFLDWNQAVSIRKAKQTNVISSVIAPQTR- 253
           +LW IW  RN KVW+ +      A+ ++ ++   W  A   R +  T V  S   PQ   
Sbjct: 2   MLWCIWRRRNDKVWDGQLQPSNIAVQLARELLFQWQAA---RNSATTQVQQS---PQDTI 55

Query: 254 -WSPPEIGCFKLNTDASIRSNSASFSIGLVLRDHLGSFVAGKVESFTNCHTVLEAETFAI 430
            W PP  G  K N DA+I S    F  G+ +RD  G F+      +  C    EAE   +
Sbjct: 56  AWQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGL 115

Query: 431 WEGFKWLASMSYQHVSIESDSFLSVQAIRRPCENMLELGHILESCRTIMQSRVGFSISFV 610
            +   WL  +   +V +E D  L V +I     N  E G I++ CR+++Q    F ISFV
Sbjct: 116 RDAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFV 175

Query: 611 KR 616
           +R
Sbjct: 176 RR 177


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
 Frame = +2

Query: 56  EVVRIARVLWGIWFFRNKKVWENKSITHVTAMDMSAKMFLDWNQAVSIRKA--------- 208
           E  +I   +W +W  RN KVWENK+ +    +D +  M  +W  A + R A         
Sbjct: 266 EQSQIFVTMWSLWKRRNLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQ 325

Query: 209 --------------KQTNVISSVIA-----PQTRWSPPEIGCFKLNTDASIRSNSASFSI 331
                         +Q++V S+V A     P   W  P  G FK N DA   ++     I
Sbjct: 326 NPSAATAQQPVVHLQQSHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGI 385

Query: 332 GLVLRDHLGSFVAGKVESFTNCHTVLEAETFAIWEGFKWLASMSYQHVSIESDSFLSVQA 511
           G+ +RD  G++V  K  SF   H V   E   ++   +WL+ M + ++    DS ++  A
Sbjct: 386 GICVRDDDGAYVLAKTISFDVVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDA 445

Query: 512 IRRPCENMLELGHILESCRTIMQSRVGFS-ISFVKR 616
                +++ E GHI+ + +++  +    S + F++R
Sbjct: 446 FNSQKDDISEFGHIISARQSLFSTHFTNSRVEFIRR 481


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 612

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 29/216 (13%)
 Frame = +2

Query: 56   EVVRIARVLWGIWFFRNKKVWENKSITHVTAMDMSAKMFLDWNQAVSIRKA--------- 208
            E  +I   +W +W  RN KVWENK+ +    +D +  M  +W  A + R A         
Sbjct: 359  EQSQIFVTMWSLWKRRNLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQ 418

Query: 209  --------------KQTNVISSVIA-----PQTRWSPPEIGCFKLNTDASIRSNSASFSI 331
                          +Q++V S+V A     P   W  P  G FK N DA   ++     I
Sbjct: 419  NPSAATAQQPVVHLQQSHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGI 478

Query: 332  GLVLRDHLGSFVAGKVESFTNCHTVLEAETFAIWEGFKWLASMSYQHVSIESDSFLSVQA 511
            G+ +RD  G++V  K  SF   H V   E   ++   +WL+ M + ++    DS ++  A
Sbjct: 479  GICVRDDDGAYVLAKTISFDVVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDA 538

Query: 512  IRRPCENMLELGHILESCRTIMQSRVGFS-ISFVKR 616
                 +++ E GHI+ + +++  +    S + F++R
Sbjct: 539  FNSQKDDISEFGHIISARQSLFSTHFTNSRVEFIRR 574


>gb|ABN08583.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 207

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
 Frame = +2

Query: 65  RIARVLWGIWFFRNKKVWENKSITHVTAMDMSAKMFLDWNQA------VSIRKAKQ---T 217
           RIA + W +W  +N K+WEN + +    ++ +  +  DW +A        +++A Q    
Sbjct: 12  RIAAICWSLWKHQNLKIWENVTESSAQVVERARHIIEDWQEANLPSQTAPLQEAAQQQAA 71

Query: 218 NVISSVIAPQT--------RWSPPEIGCFKLNTDASIRSNSASFSIGLVLRDHLGSFVAG 373
           N +   + PQ         +W PP  G FK N DA          I + LRD  G+FV  
Sbjct: 72  NTLQHSVQPQNSPTGPAVPQWFPPSRGRFKCNIDADFSEQFQRTGIRMCLRDDSGTFVLA 131

Query: 374 KVESFTNCHTVLEAETFAIWEGFKWLASMSYQHVSIESDSFLSVQAIRRPCENMLELGHI 553
           KV  F   + V   E   ++   +W+  M + ++  E DS ++  A      ++ + G+I
Sbjct: 132 KVMPFDQVYLVAVGEALGLYHAIQWMQDMQFDNIDFELDSKITRDAFHSIMTDITKFGNI 191

Query: 554 LESCR 568
           ++ CR
Sbjct: 192 IDECR 196


>ref|XP_003615225.1| hypothetical protein MTR_5g065390 [Medicago truncatula]
           gi|355516560|gb|AES98183.1| hypothetical protein
           MTR_5g065390 [Medicago truncatula]
          Length = 365

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
 Frame = +2

Query: 68  IARVLWGIWFFRNKKVWENKSITHVTAMDMSAKMFLDWNQAVSIRKAKQTNVI------- 226
           +  +LW +W  RN KVWE+ + T    ++ +  +  DW  A  +R + Q   +       
Sbjct: 164 LVMILWILWKHRNLKVWEDVTETWAVVIERARVLLDDWELANGLRTSMQPAPLGLQQQSD 223

Query: 227 ---SSVIAP---------QTRWSPPEIGCFKLNTDASIRSNSASFSIGLVLRDHLGSFVA 370
              SSV+ P         Q  W  P     K N D +  +     S+G+ LRD  G FV 
Sbjct: 224 AGASSVVVPAPFVTIALHQINWQSPASSRLKCNIDTTFSTPHNRTSVGICLRDDEGIFVL 283

Query: 371 GKVESFTNCHTVLEAETFAIWEGFKWLASMSYQHVSIESDSFLSVQAIRRPCENMLELGH 550
            K+ SF   ++    ET  ++   +WL+ M   ++  E DS ++  A     E++ E GH
Sbjct: 284 AKIVSFAGVYSAEVGETLGLFHTIQWLSDMKMNNIDFEVDSKITKDAFTSRREDIFEFGH 343

Query: 551 IL 556
           I+
Sbjct: 344 IV 345