BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039297
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22243.3| unnamed protein product [Vitis vinifera]              218   3e-55
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi...   218   3e-55
ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-53
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi...   210   8e-53
ref|XP_002873718.1| pentatricopeptide repeat-containing protein ...   209   1e-52

>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  218 bits (556), Expect = 3e-55
 Identities = 100/138 (72%), Positives = 123/138 (89%)
 Frame = +2

Query: 5   KAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIACS 184
           +A+ VF+GMR+K VSTWNS++ GLA+HGH+E+SI  F EM +L +RP+EITFVGVL+ACS
Sbjct: 295 RALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACS 354

Query: 185 HAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIVW 364
           HAG+VE+GR++F LMRD YNIEPNI+HYGCMVD+LGR+GLL+EAF FIDTM IEPN IVW
Sbjct: 355 HAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVW 414

Query: 365 RTLLGACRIYNNVELAKR 418
           RTLLGACRI+ NVEL +R
Sbjct: 415 RTLLGACRIHGNVELGRR 432



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/135 (23%), Positives = 67/135 (49%)
 Frame = +2

Query: 2   EKAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIAC 181
           E A  +F  +  + V TWN++I G    G +++++  F+EM  +   P+E+T + +L AC
Sbjct: 192 ESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSAC 251

Query: 182 SHAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIV 361
           +  G ++ G+R    + ++   + ++     ++DM  + G +  A      M  E +   
Sbjct: 252 TDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMR-EKDVST 310

Query: 362 WRTLLGACRIYNNVE 406
           W ++LG    + + E
Sbjct: 311 WNSVLGGLAFHGHAE 325


>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Vitis vinifera]
          Length = 550

 Score =  218 bits (556), Expect = 3e-55
 Identities = 100/138 (72%), Positives = 123/138 (89%)
 Frame = +2

Query: 5   KAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIACS 184
           +A+ VF+GMR+K VSTWNS++ GLA+HGH+E+SI  F EM +L +RP+EITFVGVL+ACS
Sbjct: 330 RALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACS 389

Query: 185 HAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIVW 364
           HAG+VE+GR++F LMRD YNIEPNI+HYGCMVD+LGR+GLL+EAF FIDTM IEPN IVW
Sbjct: 390 HAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVW 449

Query: 365 RTLLGACRIYNNVELAKR 418
           RTLLGACRI+ NVEL +R
Sbjct: 450 RTLLGACRIHGNVELGRR 467



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/135 (23%), Positives = 67/135 (49%)
 Frame = +2

Query: 2   EKAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIAC 181
           E A  +F  +  + V TWN++I G    G +++++  F+EM  +   P+E+T + +L AC
Sbjct: 227 ESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSAC 286

Query: 182 SHAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIV 361
           +  G ++ G+R    + ++   + ++     ++DM  + G +  A      M  E +   
Sbjct: 287 TDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMR-EKDVST 345

Query: 362 WRTLLGACRIYNNVE 406
           W ++LG    + + E
Sbjct: 346 WNSVLGGLAFHGHAE 360


>ref|XP_004170804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like, partial [Cucumis sativus]
          Length = 315

 Score =  210 bits (535), Expect = 8e-53
 Identities = 97/137 (70%), Positives = 118/137 (86%)
 Frame = +2

Query: 8   AISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIACSH 187
           A+ VF+GMR K  S+WNSII GLA HGH+EESI  F+EMLRL ++PNEITFV VL+ACSH
Sbjct: 104 ALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSH 163

Query: 188 AGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIVWR 367
           AGKV +GR +F LM++V+ IEPNIKHYGCMVD+LGR+GLL EAF FIDTM+IEPN I+WR
Sbjct: 164 AGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWR 223

Query: 368 TLLGACRIYNNVELAKR 418
           TLLGACR++ +VEL +R
Sbjct: 224 TLLGACRVHGDVELGRR 240



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 32/134 (23%), Positives = 66/134 (49%)
 Frame = +2

Query: 5   KAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIACS 184
           KA  +F  +  K V TWN++I G      ++E++  F  M  L  RP+++T + +L A +
Sbjct: 1   KARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASA 60

Query: 185 HAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIVW 364
             G +E G++  R + D+   + ++     ++DM  + G +  A      M  + +   W
Sbjct: 61  DLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMR-KKDTSSW 119

Query: 365 RTLLGACRIYNNVE 406
            +++G   ++ + E
Sbjct: 120 NSIIGGLALHGHAE 133


>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15300-like [Cucumis sativus]
          Length = 542

 Score =  210 bits (535), Expect = 8e-53
 Identities = 97/137 (70%), Positives = 118/137 (86%)
 Frame = +2

Query: 8   AISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIACSH 187
           A+ VF+GMR K  S+WNSII GLA HGH+EESI  F+EMLRL ++PNEITFV VL+ACSH
Sbjct: 331 ALEVFQGMRKKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSH 390

Query: 188 AGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIVWR 367
           AGKV +GR +F LM++V+ IEPNIKHYGCMVD+LGR+GLL EAF FIDTM+IEPN I+WR
Sbjct: 391 AGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWR 450

Query: 368 TLLGACRIYNNVELAKR 418
           TLLGACR++ +VEL +R
Sbjct: 451 TLLGACRVHGDVELGRR 467



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 33/135 (24%), Positives = 67/135 (49%)
 Frame = +2

Query: 2   EKAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIAC 181
           EKA  +F  +  K V TWN++I G      ++E++  F  M  L  RP+++T + +L A 
Sbjct: 227 EKARKLFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSAS 286

Query: 182 SHAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIV 361
           +  G +E G++  R + D+   + ++     ++DM  + G +  A      M  + +   
Sbjct: 287 ADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMR-KKDTSS 345

Query: 362 WRTLLGACRIYNNVE 406
           W +++G   ++ + E
Sbjct: 346 WNSIIGGLALHGHAE 360


>ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297319555|gb|EFH49977.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 548

 Score =  209 bits (533), Expect = 1e-52
 Identities = 93/138 (67%), Positives = 123/138 (89%)
 Frame = +2

Query: 2   EKAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIAC 181
           ++AI VFRGM+D+ +STWN++I+GLA H H+E S+  F+EM RL + PNE+TF+GV++AC
Sbjct: 332 DRAIEVFRGMKDRDLSTWNTLIVGLALH-HAEGSVEMFEEMQRLKVWPNEVTFIGVILAC 390

Query: 182 SHAGKVEDGRRFFRLMRDVYNIEPNIKHYGCMVDMLGRSGLLDEAFVFIDTMDIEPNGIV 361
           SH+G+V++GR++F LMRD+YNIEPNIKHYGCMVDMLGR+GLL+EAF+F+++M IEPN IV
Sbjct: 391 SHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIV 450

Query: 362 WRTLLGACRIYNNVELAK 415
           WRTLLGAC+IY NVEL K
Sbjct: 451 WRTLLGACKIYGNVELGK 468



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
 Frame = +2

Query: 2   EKAISVFRGMRDKLVSTWNSIILGLAYHGHSEESIGFFKEMLRLNLRPNEITFVGVLIAC 181
           + A  +F    +K V TWN++I G    G+ +E++  FKEM      P+ +T + +L AC
Sbjct: 226 DSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSAC 285

Query: 182 SHAGKVEDGRRFFRLMRDVYNIEPNI----KHYGCMVDMLGRSGLLDEAF-VFIDTMDIE 346
           +  G +E G+R    + +  ++  +I      +  ++DM  + G +D A  VF    D +
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDRD 345

Query: 347 PNGIVWRTLL 376
            +   W TL+
Sbjct: 346 LS--TWNTLI 353