BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039278
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36
ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_002529725.1| pentatricopeptide repeat-containing protein,...   141   6e-32

>ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  154 bits (390), Expect = 6e-36
 Identities = 72/142 (50%), Positives = 101/142 (71%)
 Frame = -3

Query: 428 TALSACCKGMIFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSD 249
           TA+S+C   M  EG+QCH   LK+GL F+QYVKNAL+++YS CSD+G A+ +L++VPG+D
Sbjct: 129 TAISSCDSQMYVEGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGND 188

Query: 248 IVTYNSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHN 69
           I  YN +++GLL H  + EA+DVL  I+ E   W+  TY+ IF LCA LKD  +G QVH 
Sbjct: 189 IFCYNLVVNGLLQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHA 248

Query: 68  HLLKNSEEFGFYVTSSLMDMYG 3
            +LK+  +   Y+ SS++DMYG
Sbjct: 249 QMLKSDIDCDVYIGSSIIDMYG 270



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/122 (34%), Positives = 60/122 (49%)
 Frame = -3

Query: 422 LSACCKGMIFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSDIV 243
           LSA C G      Q H    K+GL     V NAL+ MY    D+  A  V  ++   +I+
Sbjct: 338 LSALCLG-----DQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQSVFSNMTCCNII 392

Query: 242 TYNSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHNHL 63
           T+N+II+G   HG   EAL +   ++   +  + VT+I +   CA LK    G    NHL
Sbjct: 393 TWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKLVDEGFYYFNHL 452

Query: 62  LK 57
           +K
Sbjct: 453 MK 454


>ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/143 (51%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
 Frame = -3

Query: 428 TALSACC-KGMIFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGS 252
           T +S+C   G + EG QCH   LK+GLVF+QYVKNAL+ MYS  SD+ GAM V + VPG 
Sbjct: 134 TIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGL 193

Query: 251 DIVTYNSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVH 72
           D+ +YN II+GLL++G  +EAL+VL+R+V E   WD VTY+  F LC+ LKD ++G+QVH
Sbjct: 194 DVFSYNIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVH 253

Query: 71  NHLLKNSEEFGFYVTSSLMDMYG 3
             + +   E+  +V+S+++DMYG
Sbjct: 254 CRMFRTGAEYDSFVSSAIIDMYG 276



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/128 (25%), Positives = 66/128 (51%)
 Frame = -3

Query: 389 GQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSDIVTYNSIISGLLD 210
           G Q HC   +TG  +  +V +A++ MY  C ++  A  V + +   ++V++ +I++    
Sbjct: 249 GLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQ 308

Query: 209 HGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHNHLLKNSEEFGFYV 30
           +GC  EAL+    + ++    +E T+  + + CA +     G  +H  + K+  E    V
Sbjct: 309 NGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIV 368

Query: 29  TSSLMDMY 6
            ++L++MY
Sbjct: 369 GNALINMY 376



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
 Frame = -3

Query: 410 CKGM--IFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSDIVTY 237
           C G+  +  G+  H    K+G   +  V NAL+ MYS    +  A  V   +   D +T+
Sbjct: 341 CAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITW 400

Query: 236 NSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHNHLLK 57
           +++I GL  HG   EAL V   ++   +    VT++ + S CA L   + G    N L+K
Sbjct: 401 SAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSVQEGFYYLNQLMK 460

Query: 56  NS 51
            +
Sbjct: 461 QT 462


>ref|XP_002324065.1| predicted protein [Populus trichocarpa] gi|222867067|gb|EEF04198.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  150 bits (379), Expect = 1e-34
 Identities = 73/142 (51%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
 Frame = -3

Query: 425 ALSACC-KGMIFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSD 249
           A+S+CC +G + EG+QCH L LKTG  F+ YV+NALV MYS CS +  AMGV + VP +D
Sbjct: 139 AISSCCDRGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVND 198

Query: 248 IVTYNSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHN 69
           IV YNSI+S L+++G + E L+VL  +V E   WD+VT++N FSLCA LKD ++G+ VH 
Sbjct: 199 IVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHG 258

Query: 68  HLLKNSEEFGFYVTSSLMDMYG 3
            +L +  E   YV+S++++MYG
Sbjct: 259 KMLTSDVECDAYVSSAIINMYG 280



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/111 (27%), Positives = 58/111 (52%)
 Frame = -3

Query: 338 YVKNALVRMYSVCSDLGGAMGVLHSVPGSDIVTYNSIISGLLDHGCVNEALDVLNRIVLE 159
           YV +A++ MY  C     A GV   +   ++V + ++++    +GC  EAL++ +++  E
Sbjct: 270 YVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQE 329

Query: 158 YKAWDEVTYINIFSLCARLKDTKMGMQVHNHLLKNSEEFGFYVTSSLMDMY 6
               +E TY  + + CA L   + G  +H H  K+  +    V ++L++MY
Sbjct: 330 NVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMY 380



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/111 (29%), Positives = 53/111 (47%)
 Frame = -3

Query: 389 GQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSDIVTYNSIISGLLD 210
           G   H    K+G   +  V NAL+ MY+   D+  A  V   +   DI+T+N++I G   
Sbjct: 354 GSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSH 413

Query: 209 HGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHNHLLK 57
           HG   +AL V   ++   +  + VT+  + S C  L   + G    +HL+K
Sbjct: 414 HGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMK 464


>ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/144 (47%), Positives = 99/144 (68%), Gaps = 2/144 (1%)
 Frame = -3

Query: 428 TALSACC--KGMIFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPG 255
           T + +CC   G + EG+QCH   LK+GL+ +QYVKNAL+ MYS C  +  AM +L +VPG
Sbjct: 132 TIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPG 191

Query: 254 SDIVTYNSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQV 75
            D+ +YNSI+S L++ GC  EA  VL R+V E   WD VTY+++  LCA+++D ++G+Q+
Sbjct: 192 DDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQI 251

Query: 74  HNHLLKNSEEFGFYVTSSLMDMYG 3
           H  LLK    F  +V+S+L+D YG
Sbjct: 252 HAQLLKTGLVFDVFVSSTLIDTYG 275



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/128 (25%), Positives = 64/128 (50%)
 Frame = -3

Query: 389 GQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGSDIVTYNSIISGLLD 210
           G Q H   LKTGLVF  +V + L+  Y  C ++  A      +   ++V + ++++  L 
Sbjct: 248 GLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQ 307

Query: 209 HGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVHNHLLKNSEEFGFYV 30
           +G   E L++  ++ LE    +E T+  + + CA L     G  +H  ++ +  +    V
Sbjct: 308 NGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIV 367

Query: 29  TSSLMDMY 6
            ++L++MY
Sbjct: 368 GNALINMY 375


>ref|XP_002529725.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530789|gb|EEF32654.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 347

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/143 (47%), Positives = 99/143 (69%), Gaps = 1/143 (0%)
 Frame = -3

Query: 428 TALSACC-KGMIFEGQQCHCLGLKTGLVFYQYVKNALVRMYSVCSDLGGAMGVLHSVPGS 252
           TALS+C   G I  G QCH    K+GLVF+QYV+NAL+ MYS C  +  AM +  SVP +
Sbjct: 45  TALSSCSDSGRIEVGIQCHGFAFKSGLVFHQYVRNALIHMYSKCLTIQEAMRISDSVPRN 104

Query: 251 DIVTYNSIISGLLDHGCVNEALDVLNRIVLEYKAWDEVTYINIFSLCARLKDTKMGMQVH 72
           DI  YNS++ GL+++G + E L++L ++V+E   WD VTY+N+F LCA LK+ K+G+QVH
Sbjct: 105 DIFAYNSVLIGLMENGYLMEGLEILRKMVIENVEWDIVTYVNVFGLCACLKNLKLGLQVH 164

Query: 71  NHLLKNSEEFGFYVTSSLMDMYG 3
             +L ++ +   YV S+ ++MYG
Sbjct: 165 GRMLMSNVKCDAYVNSAAINMYG 187