BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039272
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531596.1| pentatricopeptide repeat-containing protein,...    63   3e-08
emb|CBI20322.3| unnamed protein product [Vitis vinifera]               58   7e-07
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-07
ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containi...    58   9e-07
ref|XP_002517927.1| pentatricopeptide repeat-containing protein,...    57   1e-06

>ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528792|gb|EEF30799.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 300

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = -2

Query: 218 TRTGPLLWLRSYSSPTQSKPNENSRLFQRISTLRDPKVSIIPVLDQWITQGNTLKEPQFQ 39
           T T    W R      + K N N +L++RIS + DPKVSI+P+LDQWI +G ++ + Q Q
Sbjct: 32  TPTSSQKWFRE-----RGKDNLN-QLYRRISPVGDPKVSIVPILDQWIEEGKSVNKDQLQ 85

Query: 38  RFVRELRARKRY 3
            F++ELR  KRY
Sbjct: 86  VFIKELRYCKRY 97


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/50 (46%), Positives = 36/50 (72%)
 Frame = -2

Query: 152 NSRLFQRISTLRDPKVSIIPVLDQWITQGNTLKEPQFQRFVRELRARKRY 3
           N  L+ RIS L  P +S++PVLDQW+ +G  +++ +  R +R+LR+RKRY
Sbjct: 36  NINLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRY 85


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 23/50 (46%), Positives = 36/50 (72%)
 Frame = -2

Query: 152 NSRLFQRISTLRDPKVSIIPVLDQWITQGNTLKEPQFQRFVRELRARKRY 3
           N  L+ RIS L  P +S++PVLDQW+ +G  +++ +  R +R+LR+RKRY
Sbjct: 36  NINLYSRISPLGTPNLSLVPVLDQWVEEGKKVRDVELHRIIRDLRSRKRY 85


>ref|XP_003545936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Glycine max]
          Length = 486

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/63 (41%), Positives = 40/63 (63%)
 Frame = -2

Query: 191 RSYSSPTQSKPNENSRLFQRISTLRDPKVSIIPVLDQWITQGNTLKEPQFQRFVRELRAR 12
           RSY +    KP+    L+ +IS L +P  S++PVLD W+ +GN L+  + QR +R+LR R
Sbjct: 11  RSYYTSRSKKPS----LYSKISPLGNPNTSVVPVLDDWVFKGNKLRVAELQRIIRDLRKR 66

Query: 11  KRY 3
            R+
Sbjct: 67  SRF 69


>ref|XP_002517927.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542909|gb|EEF44445.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/66 (39%), Positives = 43/66 (65%)
 Frame = -2

Query: 200 LWLRSYSSPTQSKPNENSRLFQRISTLRDPKVSIIPVLDQWITQGNTLKEPQFQRFVREL 21
           L+  + S    S  +E+S+L+ RI  +RDPK SIIPVL+QW+++G+T+ +   Q  V  +
Sbjct: 31  LFFSTRSQTQSSSSSESSKLYDRIQIVRDPKESIIPVLNQWVSEGHTVGKALLQSLVHLM 90

Query: 20  RARKRY 3
           +  KR+
Sbjct: 91  KGYKRF 96