BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039268
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...   138   2e-31
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
emb|CBI24922.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   137   1e-30
ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana] gi|1...   136   2e-30

>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
           predicted protein [Populus trichocarpa]
          Length = 1468

 Score =  138 bits (348), Expect(2) = 2e-31
 Identities = 67/83 (80%), Positives = 72/83 (86%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 VYVPELIFGHLLTSSNYDDDQKKTTGGRNGYGAKLTNIFSTEFVIETADGKLE--YRQVF 71
           VYVPELIFGHLLTSSNYDD +KKTTGGRNGYGAKLTNIFSTEFVIETADGK +  Y+QVF
Sbjct: 111 VYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVF 170

Query: 70  KDNMKTKDEPRITKCTESDNWTK 2
            +NM  K EP ITKC E +NWTK
Sbjct: 171 SNNMGKKSEPMITKCKEGENWTK 193



 Score = 21.9 bits (45), Expect(2) = 2e-31
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -2

Query: 272 EIHKKEGVY 246
           EIHK+EGVY
Sbjct: 104 EIHKEEGVY 112


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
           predicted protein [Populus trichocarpa]
          Length = 1482

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/83 (80%), Positives = 72/83 (86%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 VYVPELIFGHLLTSSNYDDDQKKTTGGRNGYGAKLTNIFSTEFVIETADG--KLEYRQVF 71
           VYVPELIFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFSTEFVIETADG  K +Y+QVF
Sbjct: 128 VYVPELIFGHLLTSSNYDDTMKKTTGGRNGYGAKLTNIFSTEFVIETADGKRKKKYKQVF 187

Query: 70  KDNMKTKDEPRITKCTESDNWTK 2
            +NM  + EP ITKC ES+NWTK
Sbjct: 188 SNNMGKRSEPIITKCKESENWTK 210


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/83 (79%), Positives = 72/83 (86%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 VYVPELIFGHLLTSSNYDDDQKKTTGGRNGYGAKLTNIFSTEFVIETADGKLE--YRQVF 71
           VYVPE+IFGHLLTSSNYDDD KKTTGGRNGYGAKLTNIFSTEFVIETADG+ +  Y+QVF
Sbjct: 130 VYVPEMIFGHLLTSSNYDDDVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVF 189

Query: 70  KDNMKTKDEPRITKCTESDNWTK 2
            +NM  K EP ITKC E +NWTK
Sbjct: 190 SNNMGKKSEPVITKCKERENWTK 212


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  137 bits (344), Expect = 1e-30
 Identities = 66/83 (79%), Positives = 72/83 (86%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 VYVPELIFGHLLTSSNYDDDQKKTTGGRNGYGAKLTNIFSTEFVIETADGKLE--YRQVF 71
           VYVPE+IFGHLLTSSNYDDD KKTTGGRNGYGAKLTNIFSTEFVIETADG+ +  Y+QVF
Sbjct: 130 VYVPEMIFGHLLTSSNYDDDVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKKYKQVF 189

Query: 70  KDNMKTKDEPRITKCTESDNWTK 2
            +NM  K EP ITKC E +NWTK
Sbjct: 190 SNNMGKKSEPVITKCKERENWTK 212


>ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
           gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA
           topoisomerase 2; AltName: Full=DNA topoisomerase II
           gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis
           thaliana] gi|9294657|dbj|BAB03006.1| DNA topoisomerase
           II [Arabidopsis thaliana] gi|332643305|gb|AEE76826.1|
           DNA topoisomerase 2 [Arabidopsis thaliana]
          Length = 1473

 Score =  136 bits (342), Expect = 2e-30
 Identities = 64/83 (77%), Positives = 74/83 (89%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 VYVPELIFGHLLTSSNYDDDQKKTTGGRNGYGAKLTNIFSTEFVIETADGK--LEYRQVF 71
           +YVPE+IFGHLLTSSNYDD+ KKTTGGRNGYGAKLTNIFSTEF+IETADGK   +Y+QVF
Sbjct: 135 IYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 194

Query: 70  KDNMKTKDEPRITKCTESDNWTK 2
           ++NM  K EP ITKC +S+NWTK
Sbjct: 195 ENNMGKKSEPVITKCNKSENWTK 217