BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039263
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   130   1e-28
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   130   2e-28
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   128   9e-28
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   127   2e-27
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi...   126   3e-27

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  130 bits (328), Expect = 1e-28
 Identities = 65/118 (55%), Positives = 84/118 (71%)
 Frame = -3

Query: 356  LQLCLEDTPKLPDPEVYRRLVGKLLYLNLTGPDISYSVQQLSQFLSSPAQSHLIAALHVL 177
            L+L  ED   L DP  YRRLVG+L+YL +T PDI YSV+ LSQF+++P + H  AAL VL
Sbjct: 1491 LKLTNEDGELLHDPSRYRRLVGRLIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVL 1550

Query: 176  KYLKGTLNVGLFYKANVPMELSADCDADWGSCPFSARSLSGYAIFLGSSLISWRKQFQ 3
            +Y+KG+   GLF  +   + LSA CD+DWG C  S RS+SGY +FLGSSLISW+ + Q
Sbjct: 1551 RYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQ 1608


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  130 bits (327), Expect = 2e-28
 Identities = 62/117 (52%), Positives = 82/117 (70%)
 Frame = -3

Query: 353 QLCLEDTPKLPDPEVYRRLVGKLLYLNLTGPDISYSVQQLSQFLSSPAQSHLIAALHVLK 174
           +L L  +P L DP  YRRLVG+L+YL  T PD++YSV  LSQF++ P + HL AA  VL+
Sbjct: 160 KLSLSTSPLLEDPAPYRRLVGQLIYLTNTRPDLAYSVHILSQFMNKPTEDHLAAAHRVLR 219

Query: 173 YLKGTLNVGLFYKANVPMELSADCDADWGSCPFSARSLSGYAIFLGSSLISWRKQFQ 3
           YLKG    G+FY +N  ++LS  CDADWGSCP + RS+SG  + LG S+ISW+ + Q
Sbjct: 220 YLKGCPAQGVFYPSNQTLQLSVFCDADWGSCPLTRRSVSGCCVLLGQSVISWKTKKQ 276


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  128 bits (321), Expect = 9e-28
 Identities = 61/120 (50%), Positives = 85/120 (70%)
 Frame = -3

Query: 362  AGLQLCLEDTPKLPDPEVYRRLVGKLLYLNLTGPDISYSVQQLSQFLSSPAQSHLIAALH 183
            A ++L +++   LPD  +YRRL+GKLLYL LT PDISY V +LSQF+S P   HL AA  
Sbjct: 1023 ANVKLSMDEGVDLPDVSLYRRLLGKLLYLTLTRPDISYVVGRLSQFISRPKLPHLHAAQR 1082

Query: 182  VLKYLKGTLNVGLFYKANVPMELSADCDADWGSCPFSARSLSGYAIFLGSSLISWRKQFQ 3
            +L+YLKG   +GLF+ +N  + L A  D+DW  CP S RS++G+ +FLG+SL+SW+ + Q
Sbjct: 1083 ILRYLKGNPGMGLFFPSNSELXLMAYTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKKQ 1142


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  127 bits (318), Expect = 2e-27
 Identities = 63/112 (56%), Positives = 79/112 (70%)
 Frame = -3

Query: 338  DTPKLPDPEVYRRLVGKLLYLNLTGPDISYSVQQLSQFLSSPAQSHLIAALHVLKYLKGT 159
            D   + +PEVYRRLVGKL+YL +T PDI+Y++ +L QF SSP  SHL AA  V+ YLKGT
Sbjct: 1243 DEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYLKGT 1302

Query: 158  LNVGLFYKANVPMELSADCDADWGSCPFSARSLSGYAIFLGSSLISWRKQFQ 3
            + +GLFY +   + L A  DADWGSC  S RS SG  +FLG SLISW+ + Q
Sbjct: 1303 IGLGLFYSSKSDLCLKAYTDADWGSCVDSRRSTSGICMFLGDSLISWKSKKQ 1354


>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1461

 Score =  126 bits (316), Expect = 3e-27
 Identities = 61/118 (51%), Positives = 82/118 (69%)
 Frame = -3

Query: 356  LQLCLEDTPKLPDPEVYRRLVGKLLYLNLTGPDISYSVQQLSQFLSSPAQSHLIAALHVL 177
            ++L   D   L D E+YRRLVGKL+YL +T PDI+++V +L QF S+P  +HL A   VL
Sbjct: 1223 IRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVL 1282

Query: 176  KYLKGTLNVGLFYKANVPMELSADCDADWGSCPFSARSLSGYAIFLGSSLISWRKQFQ 3
            +Y+KGT+  GLFY A   + L    DADWG+CP S RS +G+ +F+GSSLISWR + Q
Sbjct: 1283 QYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQ 1340