BLASTX nr result

ID: Cnidium21_contig00039249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039249
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256...   187   6e-46
emb|CBI31409.3| unnamed protein product [Vitis vinifera]              187   6e-46
ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis...   187   8e-46
ref|XP_002311988.1| hypothetical protein POPTRDRAFT_765239 [Popu...   182   3e-44
ref|XP_004172849.1| PREDICTED: putative transcription elongation...   176   2e-42

>ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
          Length = 2667

 Score =  187 bits (476), Expect = 6e-46
 Identities = 100/155 (64%), Positives = 119/155 (76%)
 Frame = +2

Query: 2    FIEAYKKNDIYEACNGLCSIYPSRVAAVKPAEI*KMIYMRSKSCNITVGTFARVKSGKYK 181
            +IEA K+ DI EAC GLCSIY SRVA V   E+  ++ +RSK   I+ GT+AR+K+GKYK
Sbjct: 1210 YIEADKQCDINEACKGLCSIYTSRVAPVPKNEVTHLLSVRSKCNEISEGTWARMKNGKYK 1269

Query: 182  GDLAQVVAVNESKKKATVKLIPRIDLQAMAAKFGGGVXXXXXXXXXXXXRLISSSELEEF 361
            GDLAQ+V V++++KKATVKLIPRIDLQAMA KFGGGV            RLISSSELEEF
Sbjct: 1270 GDLAQIVVVSDAQKKATVKLIPRIDLQAMAEKFGGGV--SAKKRNNPAPRLISSSELEEF 1327

Query: 362  RPLIQSRRDRDSNTFYEVLDGMLLKDGYLYKKVRI 466
            RPLIQ RRDRD+   +E+LDG +LKDGYLYKKV I
Sbjct: 1328 RPLIQYRRDRDTGKLFEILDGQMLKDGYLYKKVSI 1362


>emb|CBI31409.3| unnamed protein product [Vitis vinifera]
          Length = 675

 Score =  187 bits (476), Expect = 6e-46
 Identities = 100/155 (64%), Positives = 119/155 (76%)
 Frame = +2

Query: 2   FIEAYKKNDIYEACNGLCSIYPSRVAAVKPAEI*KMIYMRSKSCNITVGTFARVKSGKYK 181
           +IEA K+ DI EAC GLCSIY SRVA V   E+  ++ +RSK   I+ GT+AR+K+GKYK
Sbjct: 183 YIEADKQCDINEACKGLCSIYTSRVAPVPKNEVTHLLSVRSKCNEISEGTWARMKNGKYK 242

Query: 182 GDLAQVVAVNESKKKATVKLIPRIDLQAMAAKFGGGVXXXXXXXXXXXXRLISSSELEEF 361
           GDLAQ+V V++++KKATVKLIPRIDLQAMA KFGGGV            RLISSSELEEF
Sbjct: 243 GDLAQIVVVSDAQKKATVKLIPRIDLQAMAEKFGGGV--SAKKRNNPAPRLISSSELEEF 300

Query: 362 RPLIQSRRDRDSNTFYEVLDGMLLKDGYLYKKVRI 466
           RPLIQ RRDRD+   +E+LDG +LKDGYLYKKV I
Sbjct: 301 RPLIQYRRDRDTGKLFEILDGQMLKDGYLYKKVSI 335


>ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis]
           gi|223525980|gb|EEF28368.1| suppressor of ty, putative
           [Ricinus communis]
          Length = 1547

 Score =  187 bits (475), Expect = 8e-46
 Identities = 98/155 (63%), Positives = 119/155 (76%)
 Frame = +2

Query: 2   FIEAYKKNDIYEACNGLCSIYPSRVAAVKPAEI*KMIYMRSKSCNITVGTFARVKSGKYK 181
           FIEA K+ DI EAC GLCSIY +RVA +   E+  ++ +RSKS  +  G +ARVKSGKYK
Sbjct: 217 FIEADKQCDINEACKGLCSIYSTRVAPIPKNEVSHVLSVRSKSNAVREGMWARVKSGKYK 276

Query: 182 GDLAQVVAVNESKKKATVKLIPRIDLQAMAAKFGGGVXXXXXXXXXXXXRLISSSELEEF 361
           GDLAQ+V VN+++K+ATVKLIPRIDLQA+A KFGGGV            RLISSSELEEF
Sbjct: 277 GDLAQIVTVNDARKRATVKLIPRIDLQALAQKFGGGV--SMKNAATPAPRLISSSELEEF 334

Query: 362 RPLIQSRRDRDSNTFYEVLDGMLLKDGYLYKKVRI 466
           RPL+Q RRDRD+  F EVLDG++LKDGYLYK+V +
Sbjct: 335 RPLVQHRRDRDTGLFVEVLDGLMLKDGYLYKRVSV 369


>ref|XP_002311988.1| hypothetical protein POPTRDRAFT_765239 [Populus trichocarpa]
           gi|222851808|gb|EEE89355.1| hypothetical protein
           POPTRDRAFT_765239 [Populus trichocarpa]
          Length = 1853

 Score =  182 bits (461), Expect = 3e-44
 Identities = 99/156 (63%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
 Frame = +2

Query: 2   FIEAYKKNDIYEACNGLCSIYPSRVAAVKPAEI*KMIYMRSKSCN-ITVGTFARVKSGKY 178
           +IEA K+ DI EAC GLCSIY SR+A V   E+  ++ +R KSCN ++ G +ARVK+G Y
Sbjct: 188 YIEADKQIDIIEACKGLCSIYSSRMAPVPKNEVSHLLSIR-KSCNQVSEGMWARVKNGNY 246

Query: 179 KGDLAQVVAVNESKKKATVKLIPRIDLQAMAAKFGGGVXXXXXXXXXXXXRLISSSELEE 358
           KGDLAQ+VAVN+ +KKATVKLIPRIDLQA+A KFGGG+            RLISSSELEE
Sbjct: 247 KGDLAQIVAVNDVRKKATVKLIPRIDLQALAQKFGGGL--AKKKAAIPAPRLISSSELEE 304

Query: 359 FRPLIQSRRDRDSNTFYEVLDGMLLKDGYLYKKVRI 466
           FRPLIQ RRDRD+   +EVLDG++LKDGYLYK+V I
Sbjct: 305 FRPLIQYRRDRDTGKMFEVLDGLMLKDGYLYKRVSI 340


>ref|XP_004172849.1| PREDICTED: putative transcription elongation factor SPT5 homolog
           1-like, partial [Cucumis sativus]
          Length = 620

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/155 (56%), Positives = 117/155 (75%)
 Frame = +2

Query: 2   FIEAYKKNDIYEACNGLCSIYPSRVAAVKPAEI*KMIYMRSKSCNITVGTFARVKSGKYK 181
           ++EA ++ D+ EAC G+  IY +RVA+V   +I +++ +RS+   +TVGT ARVK+GKYK
Sbjct: 127 YVEAPRQYDLIEACKGITGIYSTRVASVPENDISQLLSVRSRVSEVTVGTMARVKNGKYK 186

Query: 182 GDLAQVVAVNESKKKATVKLIPRIDLQAMAAKFGGGVXXXXXXXXXXXXRLISSSELEEF 361
           GDLAQ+VAVN ++K+ATVKL+PRIDLQAMA KFGGG             RLI+SSEL EF
Sbjct: 187 GDLAQIVAVNNARKRATVKLVPRIDLQAMAEKFGGGA--AAKKTANPAPRLINSSELAEF 244

Query: 362 RPLIQSRRDRDSNTFYEVLDGMLLKDGYLYKKVRI 466
           RPL+Q RRDR++   +E LDGM+LKDGYLYKK+ +
Sbjct: 245 RPLMQFRRDRETGKLFEFLDGMMLKDGYLYKKISL 279


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