BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039246
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278416.2| PREDICTED: transcription elongation factor S...    62   6e-08
emb|CBI32841.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_003521098.1| PREDICTED: transcription elongation factor S...    61   8e-08
ref|XP_003553378.1| PREDICTED: transcription elongation factor S...    60   2e-07

>ref|XP_002278416.2| PREDICTED: transcription elongation factor SPT6-like [Vitis vinifera]
          Length = 1660

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
 Frame = -3

Query: 334  RHIDDP-QKSAPSIRSVAAMVPM------GSAATXXXXXXXXXXXXXXXXXXXXXXXXXQ 176
            RHIDDP  +SAPSIRSVAAMVPM      GS+                           +
Sbjct: 1428 RHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSSDRDR 1487

Query: 175  TFTPGSRAGRGDFRNGGNQDGH 110
            + TPGSR GR D+RNGG +DGH
Sbjct: 1488 SSTPGSRTGRNDYRNGGGRDGH 1509


>emb|CBI32841.3| unnamed protein product [Vitis vinifera]
          Length = 1646

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 37/82 (45%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
 Frame = -3

Query: 334  RHIDDP-QKSAPSIRSVAAMVPM------GSAATXXXXXXXXXXXXXXXXXXXXXXXXXQ 176
            RHIDDP  +SAPSIRSVAAMVPM      GS+                           +
Sbjct: 1414 RHIDDPLHESAPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSANSSEGGWRGQSSDRDR 1473

Query: 175  TFTPGSRAGRGDFRNGGNQDGH 110
            + TPGSR GR D+RNGG +DGH
Sbjct: 1474 SSTPGSRTGRNDYRNGGGRDGH 1495


>ref|XP_003521098.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1663

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/83 (45%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
 Frame = -3

Query: 334  RHIDDPQK-SAPSIRSVAAMVPMGSAATXXXXXXXXXXXXXXXXXXXXXXXXXQTF---- 170
            RHIDDPQ  SAPSIRSVAAMVPM S A                           ++    
Sbjct: 1434 RHIDDPQHDSAPSIRSVAAMVPMRSPAAGGSSGASVGSGWGGGSNSEGGGWRGHSYDRGD 1493

Query: 169  ---TPGSRAGRGDFRNGGNQDGH 110
               TPGSR GRG++RN GNQD H
Sbjct: 1494 RSSTPGSRTGRGEYRNNGNQDEH 1516


>ref|XP_003553378.1| PREDICTED: transcription elongation factor SPT6-like [Glycine max]
          Length = 1617

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
 Frame = -3

Query: 334  RHIDDPQK-SAPSIRSVAAMVPM------GSAATXXXXXXXXXXXXXXXXXXXXXXXXXQ 176
            RHIDDPQ  SAPSIRSV+AMVPM      GS+                           +
Sbjct: 1403 RHIDDPQHDSAPSIRSVSAMVPMRSPATGGSSGASGGSGWGGGSNSEGGWRGHSYDRGDR 1462

Query: 175  TFTPGSRAGRGDFRNGGNQDGH 110
            + TPGS+ GRG++RN GNQD H
Sbjct: 1463 SSTPGSKTGRGEYRNNGNQDEH 1484