BLASTX nr result

ID: Cnidium21_contig00039203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039203
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39605.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]   140   8e-32
ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29

>emb|CBI39605.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/98 (69%), Positives = 78/98 (79%)
 Frame = -3

Query: 294 GGLVDVGMWYLNNMKDVYGVEPKELHYGCAVDLLGRAGLFFEAEKLIGSMPMEPNGAILG 115
           GGLV  G+   N+M+  YGVEP+  HYGC VDLLGRAGL  EAEK++ S+P EP  A+ G
Sbjct: 365 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 424

Query: 114 ALLGACWKHGNLELGEKVGNILLELEPQNGGRYTLLSN 1
           ALLGAC KHGN+ELGE+VG ILLELEPQN GRYTLLSN
Sbjct: 425 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSN 462


>ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/98 (69%), Positives = 78/98 (79%)
 Frame = -3

Query: 294 GGLVDVGMWYLNNMKDVYGVEPKELHYGCAVDLLGRAGLFFEAEKLIGSMPMEPNGAILG 115
           GGLV  G+   N+M+  YGVEP+  HYGC VDLLGRAGL  EAEK++ S+P EP  A+ G
Sbjct: 413 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 472

Query: 114 ALLGACWKHGNLELGEKVGNILLELEPQNGGRYTLLSN 1
           ALLGAC KHGN+ELGE+VG ILLELEPQN GRYTLLSN
Sbjct: 473 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSN 510


>emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  140 bits (354), Expect = 8e-32
 Identities = 68/98 (69%), Positives = 78/98 (79%)
 Frame = -3

Query: 294 GGLVDVGMWYLNNMKDVYGVEPKELHYGCAVDLLGRAGLFFEAEKLIGSMPMEPNGAILG 115
           GGLV  G+   N+M+  YGVEP+  HYGC VDLLGRAGL  EAEK++ S+P EP  A+ G
Sbjct: 414 GGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWG 473

Query: 114 ALLGACWKHGNLELGEKVGNILLELEPQNGGRYTLLSN 1
           ALLGAC KHGN+ELGE+VG ILLELEPQN GRYTLLSN
Sbjct: 474 ALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSN 511


>ref|XP_002330082.1| predicted protein [Populus trichocarpa] gi|222871507|gb|EEF08638.1|
           predicted protein [Populus trichocarpa]
          Length = 665

 Score =  139 bits (350), Expect = 2e-31
 Identities = 66/97 (68%), Positives = 80/97 (82%)
 Frame = -3

Query: 291 GLVDVGMWYLNNMKDVYGVEPKELHYGCAVDLLGRAGLFFEAEKLIGSMPMEPNGAILGA 112
           G+VD G+   N+M++VYG+EP   HYGC VDLLGRAGL  EAE+++ SMPMEP+ A+ GA
Sbjct: 408 GMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGA 467

Query: 111 LLGACWKHGNLELGEKVGNILLELEPQNGGRYTLLSN 1
           LLGAC KHG++ELGE+VG ILLELEPQN GRY LLSN
Sbjct: 468 LLGACRKHGDVELGERVGKILLELEPQNSGRYALLSN 504


>ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/97 (65%), Positives = 74/97 (76%)
 Frame = -3

Query: 291 GLVDVGMWYLNNMKDVYGVEPKELHYGCAVDLLGRAGLFFEAEKLIGSMPMEPNGAILGA 112
           G VD G+     M++ YGV+P+  HYGC VDLLGR+GLF EAE LI SMPM+PN A+ GA
Sbjct: 409 GFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGA 468

Query: 111 LLGACWKHGNLELGEKVGNILLELEPQNGGRYTLLSN 1
           LLGAC  HGN +L E+VG ILLELEPQN GRY LLSN
Sbjct: 469 LLGACRIHGNFDLAERVGKILLELEPQNSGRYVLLSN 505


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