BLASTX nr result

ID: Cnidium21_contig00039192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039192
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA91962.1| transposon protein, putative, Mariner sub-class [...   132   4e-29
gb|ACV32570.1| mar1 transposase [synthetic construct]                 132   4e-29
gb|ABF93607.1| transposon protein, putative, Mariner sub-class [...   132   4e-29
gb|AAK98713.1|AC090483_3 Putative transposable element [Oryza sa...   128   4e-28
gb|ABA94040.1| transposon protein, putative, Mariner sub-class [...   120   1e-25

>gb|ABA91962.1| transposon protein, putative, Mariner sub-class [Oryza sativa
           Japonica Group]
          Length = 670

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = -1

Query: 348 MFMSVVARPRYNNDGICIFDGKIGIFPFTIIEPAKRASKNRARGVLEVKPIESINKAVIK 169
           M ++ +ARPR++++G CIFDGKIG FPF     AKR+S NR  G +E+KPIESI K VI+
Sbjct: 424 MILTALARPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNRPAGTIEMKPIESITKEVIR 483

Query: 168 QCLIEKIIPAIKAKWP-ADCNKLIVIQQDNAKPHIHESDLDFFHAAQSDGFHISL 7
             +IEK++PA++AKWP  D  K I IQQDNA+PHI   D  F  AA+ DGF+I L
Sbjct: 484 SFMIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKL 538


>gb|ACV32570.1| mar1 transposase [synthetic construct]
          Length = 576

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = -1

Query: 348 MFMSVVARPRYNNDGICIFDGKIGIFPFTIIEPAKRASKNRARGVLEVKPIESINKAVIK 169
           M ++ +ARPR++++G CIFDGKIG FPF     AKR+S NR  G +E+KPIESI K VI+
Sbjct: 352 MILTALARPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNRPAGTIEMKPIESITKEVIR 411

Query: 168 QCLIEKIIPAIKAKWP-ADCNKLIVIQQDNAKPHIHESDLDFFHAAQSDGFHISL 7
             +IEK++PA++AKWP  D  K I IQQDNA+PHI   D  F  AA+ DGF+I L
Sbjct: 412 SFMIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKL 466


>gb|ABF93607.1| transposon protein, putative, Mariner sub-class [Oryza sativa
           Japonica Group]
          Length = 827

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/115 (55%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
 Frame = -1

Query: 348 MFMSVVARPRYNNDGICIFDGKIGIFPFTIIEPAKRASKNRARGVLEVKPIESINKAVIK 169
           M ++ +ARPR++++G CIFDGKIG FPF     AKR+S NR  G +E+KPIESI K VI+
Sbjct: 424 MILTALARPRFDSNGKCIFDGKIGCFPFVTYTAAKRSSVNRPAGTIEMKPIESITKEVIR 483

Query: 168 QCLIEKIIPAIKAKWP-ADCNKLIVIQQDNAKPHIHESDLDFFHAAQSDGFHISL 7
             +IEK++PA++AKWP  D  K I IQQDNA+PHI   D  F  AA+ DGF+I L
Sbjct: 484 SFMIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKL 538


>gb|AAK98713.1|AC090483_3 Putative transposable element [Oryza sativa Japonica Group]
           gi|31431321|gb|AAP53116.1| transposon protein, putative,
           Mariner sub-class, expressed [Oryza sativa Japonica
           Group]
          Length = 397

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/115 (54%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
 Frame = -1

Query: 348 MFMSVVARPRYNNDGICIFDGKIGIFPFTIIEPAKRASKNRARGVLEVKPIESINKAVIK 169
           M ++ +ARPR++++G CIFDGKIG FPF     AKR+S N   G +E+KPIESI K VI+
Sbjct: 221 MILTALARPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNHPAGTIEMKPIESITKEVIR 280

Query: 168 QCLIEKIIPAIKAKWP-ADCNKLIVIQQDNAKPHIHESDLDFFHAAQSDGFHISL 7
              IEK++PA++AKWP  D  K I IQQDNA+PHI   D  F  AA+ DGF+I L
Sbjct: 281 SFKIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKL 335


>gb|ABA94040.1| transposon protein, putative, Mariner sub-class [Oryza sativa
           Japonica Group]
          Length = 502

 Score =  120 bits (301), Expect = 1e-25
 Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 1/115 (0%)
 Frame = -1

Query: 348 MFMSVVARPRYNNDGICIFDGKIGIFPFTIIEPAKRASKNRARGVLEVKPIESINKAVIK 169
           MF+ V ARPR+ N G C+FDGKIG FP    E A R+S+NR RG L +KPI SI + VI+
Sbjct: 276 MFLCVCARPRFRN-GECVFDGKIGCFPLVTYEHAVRSSQNRLRGELVIKPITSITRDVIR 334

Query: 168 QCLIEKIIPAIKAKWP-ADCNKLIVIQQDNAKPHIHESDLDFFHAAQSDGFHISL 7
             ++ K++PAI+AKWP  D NK I IQQDNA  H+   D DF  AA+ +GF I L
Sbjct: 335 DFMVNKVLPAIRAKWPREDVNKSIFIQQDNAPSHLKLDDPDFCEAAREEGFDIRL 389


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