BLASTX nr result

ID: Cnidium21_contig00039181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039181
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270531.1| PREDICTED: uncharacterized protein LOC100267...    92   3e-17
emb|CAN59850.1| hypothetical protein VITISV_000852 [Vitis vinifera]    92   3e-17
ref|XP_002328650.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
dbj|BAI48083.1| MIS12 homologue [Nicotiana tabacum] gi|262263171...    90   2e-16
gb|ACU21384.1| unknown [Glycine max]                                   86   4e-15

>ref|XP_002270531.1| PREDICTED: uncharacterized protein LOC100267948 [Vitis vinifera]
           gi|297734134|emb|CBI15381.3| unnamed protein product
           [Vitis vinifera]
          Length = 244

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/65 (63%), Positives = 54/65 (83%)
 Frame = +3

Query: 93  MEGGESEAIFDSLNLNPQLFLNEILNRVDDLVDGAFQCFHQEASTVLKIEGTDREDELKQ 272
           MEG ESEAIF+SLNLNPQLF+NE+LN VDDL+DGAF  + QEAS +L+ +GTDR  ++ +
Sbjct: 1   MEGSESEAIFESLNLNPQLFINEVLNLVDDLLDGAFDFYQQEASNLLRTDGTDRSGDINK 60

Query: 273 GVEYL 287
           G+ Y+
Sbjct: 61  GIGYI 65


>emb|CAN59850.1| hypothetical protein VITISV_000852 [Vitis vinifera]
          Length = 344

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/65 (63%), Positives = 54/65 (83%)
 Frame = +3

Query: 93  MEGGESEAIFDSLNLNPQLFLNEILNRVDDLVDGAFQCFHQEASTVLKIEGTDREDELKQ 272
           MEG ESEAIF+SLNLNPQLF+NE+LN VDDL+DGAF  + QEAS +L+ +GTDR  ++ +
Sbjct: 1   MEGSESEAIFESLNLNPQLFINEVLNLVDDLLDGAFDFYQQEASNLLRTDGTDRSGDINK 60

Query: 273 GVEYL 287
           G+ Y+
Sbjct: 61  GIGYI 65


>ref|XP_002328650.1| predicted protein [Populus trichocarpa] gi|222838826|gb|EEE77177.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/65 (64%), Positives = 52/65 (80%)
 Frame = +3

Query: 93  MEGGESEAIFDSLNLNPQLFLNEILNRVDDLVDGAFQCFHQEASTVLKIEGTDREDELKQ 272
           MEG ESEA+F+SLNLNPQLF+NE LN VDDL+D AF  FHQEAST+LK +GT R   + +
Sbjct: 1   MEGSESEAVFESLNLNPQLFINETLNTVDDLLDDAFHFFHQEASTLLKTDGTSRSQFISE 60

Query: 273 GVEYL 287
           G+ Y+
Sbjct: 61  GIAYV 65


>dbj|BAI48083.1| MIS12 homologue [Nicotiana tabacum] gi|262263171|dbj|BAI48088.1|
           kinetochore protein [Nicotiana tomentosiformis]
          Length = 246

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/62 (67%), Positives = 52/62 (83%)
 Frame = +3

Query: 93  MEGGESEAIFDSLNLNPQLFLNEILNRVDDLVDGAFQCFHQEASTVLKIEGTDREDELKQ 272
           MEG ESE +FDSLNLNP+LF+NE LN VD+LVD AF  FHQEA+ +LK EGT+R ++LK+
Sbjct: 1   MEGSESEKVFDSLNLNPKLFVNEALNIVDELVDDAFDFFHQEAANLLKTEGTNRSEDLKE 60

Query: 273 GV 278
           GV
Sbjct: 61  GV 62


>gb|ACU21384.1| unknown [Glycine max]
          Length = 190

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/63 (65%), Positives = 51/63 (80%)
 Frame = +3

Query: 93  MEGGESEAIFDSLNLNPQLFLNEILNRVDDLVDGAFQCFHQEASTVLKIEGTDREDELKQ 272
           ME G+SEAIF +LNLNPQLF NE+LN VDD++D AF  F+Q+AST L IEGT R  +LK+
Sbjct: 1   MEEGDSEAIFGALNLNPQLFCNEVLNIVDDVLDEAFNFFYQDASTKLNIEGTQRSQDLKK 60

Query: 273 GVE 281
           GV+
Sbjct: 61  GVD 63


Top