BLASTX nr result

ID: Cnidium21_contig00039164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039164
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE63775.1| hypothetical protein OsJ_18596 [Oryza sativa Japo...    74   1e-11
ref|NP_001055589.1| Os05g0423200 [Oryza sativa Japonica Group] g...    74   1e-11
ref|XP_002300960.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002890445.1| hypothetical protein ARALYDRAFT_889619 [Arab...    69   4e-10
emb|CBI18959.3| unnamed protein product [Vitis vinifera]               69   4e-10

>gb|EEE63775.1| hypothetical protein OsJ_18596 [Oryza sativa Japonica Group]
          Length = 386

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/106 (33%), Positives = 58/106 (54%)
 Frame = -2

Query: 320 FREELMDILRRPFNLEEYRSLMQKSKYRHLMGGPEYSDGLKGKTVSNTYGKSPLDYHPDV 141
           F E+L D+L +P++L EY+ L++K+  R L+    +         +   G S LD++PD+
Sbjct: 261 FDEKLNDVLSKPYDLNEYKELLRKATDRKLVSRQRHLRNASKPYATRAVGLSFLDHYPDL 320

Query: 140 QKRLRQCRKISRRLNILRGFIYWYERACQNGAFKPWLDKSCAAVNP 3
             ++       R+L +LR F +W E  C  GA+ PW+DK  A  NP
Sbjct: 321 AIQIDSADSDERKLCLLRKFFFWLENLCHEGAYMPWIDKPLAC-NP 365


>ref|NP_001055589.1| Os05g0423200 [Oryza sativa Japonica Group]
           gi|53980848|gb|AAV24769.1| unknown protein [Oryza sativa
           Japonica Group] gi|113579140|dbj|BAF17503.1|
           Os05g0423200 [Oryza sativa Japonica Group]
           gi|215766823|dbj|BAG99051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 391

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 36/106 (33%), Positives = 58/106 (54%)
 Frame = -2

Query: 320 FREELMDILRRPFNLEEYRSLMQKSKYRHLMGGPEYSDGLKGKTVSNTYGKSPLDYHPDV 141
           F E+L D+L +P++L EY+ L++K+  R L+    +         +   G S LD++PD+
Sbjct: 266 FDEKLNDVLSKPYDLNEYKELLRKATDRKLVSRQRHLRNASKPYATRAVGLSFLDHYPDL 325

Query: 140 QKRLRQCRKISRRLNILRGFIYWYERACQNGAFKPWLDKSCAAVNP 3
             ++       R+L +LR F +W E  C  GA+ PW+DK  A  NP
Sbjct: 326 AIQIDSADSDERKLCLLRKFFFWLENLCHEGAYMPWIDKPLAC-NP 370


>ref|XP_002300960.1| predicted protein [Populus trichocarpa] gi|222842686|gb|EEE80233.1|
            predicted protein [Populus trichocarpa]
          Length = 818

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 5/157 (3%)
 Frame = -2

Query: 458  SSDLEILDMDNQQNLRKFEVMKVLN-ASVIEDYPLSRKNPSDYENPEFREELMDILRRPF 282
            SSD E++ MD  Q L   +   V + A ++ED        S     +FREEL+ IL +P+
Sbjct: 658  SSDSEVIVMDKDQFLDGNDTPFVSSKAYIVEDEGWMDNGVSS----KFREELLKILEKPY 713

Query: 281  NLEEYRSLMQKSKYR-HLMGGPEYSDGLKGKTVSNTYGKSPLDYHPDVQKRLRQCR-KIS 108
            +  E+  L Q+  +R H+        G   +  +   GKS LD+H D++ ++R  +    
Sbjct: 714  DEREFEDLWQRISHRSHVNRDINLRSGCI-RFETKAIGKSYLDHHADLEAKIRSAQGNQP 772

Query: 107  RRLNILRGFIYWYERACQNG--AFKPWLDKSCAAVNP 3
              LN++RGF YW   A   G  A +PWLD  C  V P
Sbjct: 773  EILNLMRGFFYWLMNASHAGSRALRPWLDSLCLKVRP 809


>ref|XP_002890445.1| hypothetical protein ARALYDRAFT_889619 [Arabidopsis lyrata subsp.
           lyrata] gi|297336287|gb|EFH66704.1| hypothetical protein
           ARALYDRAFT_889619 [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/121 (33%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
 Frame = -2

Query: 341 SDYENPEFREELMDILRRPFNLEEYRSLMQK-------SKYRHLMGGPEYSDGLKGKTVS 183
           SD  N  FR+E+M++L++P+ + E + L  +       S++  L  G E+S   K KT S
Sbjct: 277 SDQRNSWFRKEIMNVLKQPYTVTELKELHNEASVHRVSSRHVELRDGTEFSFPTKKKTPS 336

Query: 182 NTYGKSPLDYHPDVQKRLRQCRKIS---RRLNILRGFIYWYERACQNGAFKPWLDKSCAA 12
                  LD +PD +K+  +  +     + LN+LRGFI++  +  ++ AFKPWLD+ C  
Sbjct: 337 Y------LDGYPDFKKQYLESLREDDEHKALNLLRGFIFYLTKVVRDDAFKPWLDQECLK 390

Query: 11  V 9
           +
Sbjct: 391 I 391


>emb|CBI18959.3| unnamed protein product [Vitis vinifera]
          Length = 234

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 4/153 (2%)
 Frame = -2

Query: 464 EHSSDLEILDMDNQQNLRKFEVMKVLNASVIEDYPLSRKNPSDYENPEFREELMDILRRP 285
           E  S+ EIL  D+   +      K+ ++S I       KN +   + +FR+ LM IL++P
Sbjct: 89  ESESESEILAADSDPCITP----KLFDSSRI-------KNRNRTGHSQFRDNLMVILKKP 137

Query: 284 FNLEEYRSLMQKSKYRHLMGGPEYSDGLKGKTVSNTY---GKSPLDYHPDVQKRLRQCR- 117
           ++  EY  L+Q+   R  +   E    L+G+  S +     KS LD+H D+++++   + 
Sbjct: 138 YDQLEYEELLQEIIQRKPL---ERHRDLRGRIKSYSVEICSKSYLDHHTDLKRKIDAVQG 194

Query: 116 KISRRLNILRGFIYWYERACQNGAFKPWLDKSC 18
              + LN+LRGF YW +     GAF+PW D SC
Sbjct: 195 DHCKILNLLRGFFYWLKNLSHEGAFQPWSDASC 227


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