BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039076
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   115   4e-24
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   112   6e-23
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       110   2e-22
ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein A...   108   8e-22

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  125 bits (315), Expect = 4e-27
 Identities = 61/179 (34%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
 Frame = +3

Query: 27  GAKVAWRSICRPKSEGGLGLKWTKDWNHALIISHIWRLITKKN-SIWVSWTYATLLKQKS 203
           GAKVAW  +C PK EGGLG+K  K+WN   ++ HIW L    + SIW +W  + LL+ ++
Sbjct: 144 GAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRN 203

Query: 204 FWTMDIPKESSWFWKKLLSLRTEAKPFINFRLGNGASIRFWTDPWWNHRSIAESCEAPMI 383
           FWT+  P+  SW W K+L LR+ A P + + +G+G +   W D W  H  +A+S     I
Sbjct: 204 FWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFI 263

Query: 384 ADANSRSDATIGEFINSGTWSLPQSNDPNFIDWRNTFTFPTFN----LDRNDSILWEDN 548
            D+    +A +   I +  W  P +     I W         N    + + D ++W D+
Sbjct: 264 YDSGMAKNAKVNVLIQNSEWKTPTT---QAIGWHPIIEAIPSNSNPKMGQKDELVWLDS 319


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  115 bits (289), Expect = 4e-24
 Identities = 54/154 (35%), Positives = 81/154 (52%)
 Frame = +3

Query: 9    DVNKIGGAKVAWRSICRPKSEGGLGLKWTKDWNHALIISHIWRLITKKNSIWVSWTYATL 188
            D+ + G  KV+W++ C PK+EGGLGL+    WN  L +  IW L  +++S+WV+W +A  
Sbjct: 843  DITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANR 902

Query: 189  LKQKSFWTMDIPKESSWFWKKLLSLRTEAKPFINFRLGNGASIRFWTDPWWNHRSIAESC 368
            L+  +FW  +     SW WK +L LR  AK F+   +GNG  + +W D W N   + E+ 
Sbjct: 903  LRHVNFWNAEAASHHSWIWKAILGLRPLAKRFLRGAVGNGQLLSYWYDHWSNLGPLIEAI 962

Query: 369  EAPMIADANSRSDATIGEFINSGTWSLPQSNDPN 470
             A           A + E  +S  W LP +   N
Sbjct: 963  GASGPQLTGIHESAVVTEASSSTGWILPSARTRN 996


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  112 bits (279), Expect = 6e-23
 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 2/172 (1%)
 Frame = +3

Query: 30  AKVAWRSICRPKSEGGLGLKWTKDWNHALIISHIWRLITKKNSIWVSWTYATLLKQKSFW 209
           AKV+W  IC+PK EGGLGL+   + N   ++  IWR+ +  +S+WV W+   LLKQ+SFW
Sbjct: 263 AKVSWDDICKPKQEGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFW 322

Query: 210 TMDIPKES--SWFWKKLLSLRTEAKPFINFRLGNGASIRFWTDPWWNHRSIAESCEAPMI 383
           ++  P  S  SW WKK+L  R  AKPF    + NGA   FW D W     + +       
Sbjct: 323 SL-TPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDNWSGMGHLMDVTGQRGQ 381

Query: 384 ADANSRSDATIGEFINSGTWSLPQSNDPNFIDWRNTFTFPTFNLDRNDSILW 539
            D     + T+ E  ++      ++   N I+      + T NL R D+ LW
Sbjct: 382 IDLGISRNKTVAEAWSNRRRRKHRTEQLNDIEAALNQKYQTRNLLREDATLW 433


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/111 (42%), Positives = 68/111 (61%)
 Frame = +3

Query: 6    GDVNKIGGAKVAWRSICRPKSEGGLGLKWTKDWNHALIISHIWRLITKKNSIWVSWTYAT 185
            G++ +  G KV+W ++C PKSEGGLGL+   +WN  L +  IWRL   K+S+W  W +  
Sbjct: 843  GNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLH 902

Query: 186  LLKQKSFWTMDIPKESSWFWKKLLSLRTEAKPFINFRLGNGASIRFWTDPW 338
             L + SFW ++  +  SW WK+LLSLR  A  F+  ++GNG    +W D W
Sbjct: 903  HLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADYWYDNW 953


>ref|XP_004169944.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 265

 Score =  108 bits (269), Expect = 8e-22
 Identities = 55/153 (35%), Positives = 78/153 (50%), Gaps = 13/153 (8%)
 Frame = +3

Query: 9   DVNKI-------------GGAKVAWRSICRPKSEGGLGLKWTKDWNHALIISHIWRLITK 149
           DVNKI             GG KVAW  +C P  EGGL ++    WN A  +  +W L+ K
Sbjct: 108 DVNKILRSYFWRGKEEGRGGDKVAWDEVCLPFDEGGLVIRDRSSWNIASTLKILWLLLVK 167

Query: 150 KNSIWVSWTYATLLKQKSFWTMDIPKESSWFWKKLLSLRTEAKPFINFRLGNGASIRFWT 329
             S+WV+W  A +LK +S W +D+    SW ++ +L  R   +  +N  +GNG   R W 
Sbjct: 168 SGSLWVAWVEAYILKGRSLWEIDVGVGRSWCFRAILRKREILEAHVNIEVGNGKKCRVWL 227

Query: 330 DPWWNHRSIAESCEAPMIADANSRSDATIGEFI 428
           DPW     I +     +I DA SR DA + +F+
Sbjct: 228 DPWIQGGPIIQQFGESVIYDAGSRWDARLVDFM 260