BLASTX nr result

ID: Cnidium21_contig00039060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039060
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299014.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-10
ref|XP_003589006.1| Chloroplast unusual positioning 1A [Medicago...    68   3e-09
ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like...    67   4e-09
emb|CBI31084.3| unnamed protein product [Vitis vinifera]               67   4e-09
ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP...    65   2e-08

>ref|XP_002299014.1| predicted protein [Populus trichocarpa] gi|222846272|gb|EEE83819.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 30/38 (78%), Positives = 37/38 (97%)
 Frame = -3

Query: 114 RMERTVYSLLRTRDSLMRNCKDFQIPTDWMVDNVILSK 1
           +MERTVY+LLRTR+SLMRNCK+FQIP+DWM+DN I+SK
Sbjct: 79  KMERTVYNLLRTRESLMRNCKEFQIPSDWMLDNGIISK 116


>ref|XP_003589006.1| Chloroplast unusual positioning 1A [Medicago truncatula]
           gi|355478054|gb|AES59257.1| Chloroplast unusual
           positioning 1A [Medicago truncatula]
          Length = 754

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 29/38 (76%), Positives = 35/38 (92%)
 Frame = -3

Query: 114 RMERTVYSLLRTRDSLMRNCKDFQIPTDWMVDNVILSK 1
           +MERTVY+LLRTRDSLMRNCK+FQIP +WM+DN I+ K
Sbjct: 643 KMERTVYTLLRTRDSLMRNCKEFQIPVEWMLDNGIIGK 680


>ref|XP_002268607.1| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera]
          Length = 801

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = -3

Query: 114 RMERTVYSLLRTRDSLMRNCKDFQIPTDWMVDNVILSK 1
           +MER+VY+L RTR+SLMRNCK+FQIPTDWM+DN I++K
Sbjct: 675 KMERSVYNLFRTRESLMRNCKEFQIPTDWMLDNGIINK 712


>emb|CBI31084.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 28/38 (73%), Positives = 36/38 (94%)
 Frame = -3

Query: 114 RMERTVYSLLRTRDSLMRNCKDFQIPTDWMVDNVILSK 1
           +MER+VY+L RTR+SLMRNCK+FQIPTDWM+DN I++K
Sbjct: 655 KMERSVYNLFRTRESLMRNCKEFQIPTDWMLDNGIINK 692


>ref|XP_004158660.1| PREDICTED: LOW QUALITY PROTEIN: protein CHUP1, chloroplastic-like
           [Cucumis sativus]
          Length = 787

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 28/38 (73%), Positives = 35/38 (92%)
 Frame = -3

Query: 114 RMERTVYSLLRTRDSLMRNCKDFQIPTDWMVDNVILSK 1
           +MER+ Y+LLR R+SLMRNCK+FQIPTDWM+DN I+SK
Sbjct: 676 KMERSSYNLLRMRESLMRNCKEFQIPTDWMLDNGIISK 713


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