BLASTX nr result

ID: Cnidium21_contig00039039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039039
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_680273.1| hAT family dimerization domain-containing prote...    55   5e-06
ref|XP_002893777.1| predicted protein [Arabidopsis lyrata subsp....    55   6e-06

>ref|NP_680273.1| hAT family dimerization domain-containing protein [Arabidopsis
           thaliana] gi|332006490|gb|AED93873.1| hAT family
           dimerization domain-containing protein [Arabidopsis
           thaliana]
          Length = 433

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/34 (64%), Positives = 30/34 (88%)
 Frame = +1

Query: 28  DKVKCKLCGRVVSGGVHRLKQHIAQVKGNVVACP 129
           D++KCKLC + +SGGV+R+K+HIA + GNVVACP
Sbjct: 38  DRIKCKLCLKEMSGGVYRIKEHIAHLPGNVVACP 71


>ref|XP_002893777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339619|gb|EFH70036.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 443

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = +1

Query: 1   GELVIKDDSDKVKCKLCGRVVSGGVHRLKQHIAQVKGNVVACP 129
           G L    + D+VKCKLCG+ + GGV+++K+HIA  KGNV +CP
Sbjct: 28  GILYDSKNPDRVKCKLCGKEMGGGVYKIKEHIAHRKGNVSSCP 70


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