BLASTX nr result

ID: Cnidium21_contig00039033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00039033
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Gly...    58   7e-07
ref|XP_003520940.1| PREDICTED: frataxin, mitochondrial-like [Gly...    58   7e-07
ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative ...    57   1e-06
ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1...    55   6e-06
emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]    55   6e-06

>ref|XP_003554058.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +1

Query: 193 SRSFCSSGLHDNASLGPLAVVYSSVLQEDEFHKLADSTIHLLLEK 327
           SR+FCS   + + S GPL + YSS+LQE EFH+LADSTIH L EK
Sbjct: 55  SRNFCSRSFNLDESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEK 99


>ref|XP_003520940.1| PREDICTED: frataxin, mitochondrial-like [Glycine max]
          Length = 191

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = +1

Query: 193 SRSFCSSGLHDNASLGPLAVVYSSVLQEDEFHKLADSTIHLLLEK 327
           SR+FCS   + + S GPL + YSS+LQE EFH+LADSTIH L EK
Sbjct: 55  SRNFCSRSFNLHESQGPLTIDYSSLLQEGEFHRLADSTIHSLQEK 99


>ref|XP_002531340.1| Frataxin, mitochondrial precursor, putative [Ricinus communis]
           gi|223529062|gb|EEF31047.1| Frataxin, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 200

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 31/46 (67%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = +1

Query: 193 SRSFCSSGLH-DNASLGPLAVVYSSVLQEDEFHKLADSTIHLLLEK 327
           SR FCS  L+ D  S GP  + YSS+LQEDEFHKLADSTIH L EK
Sbjct: 63  SRDFCSRPLNLDAHSQGPATIDYSSLLQEDEFHKLADSTIHDLQEK 108


>ref|XP_002277091.1| PREDICTED: frataxin, mitochondrial isoform 1 [Vitis vinifera]
           gi|296081250|emb|CBI17994.3| unnamed protein product
           [Vitis vinifera]
          Length = 197

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = +1

Query: 193 SRSFCSSGLH-DNASLGPLAVVYSSVLQEDEFHKLADSTIHLLLEK 327
           SRSFCS  L  ++ S GP A+ YSS+LQEDEFHK+ADSTI  L EK
Sbjct: 60  SRSFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEK 105


>emb|CAN67530.1| hypothetical protein VITISV_004311 [Vitis vinifera]
          Length = 202

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/46 (65%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
 Frame = +1

Query: 193 SRSFCSSGLH-DNASLGPLAVVYSSVLQEDEFHKLADSTIHLLLEK 327
           SRSFCS  L  ++ S GP A+ YSS+LQEDEFHK+ADSTI  L EK
Sbjct: 65  SRSFCSRTLDLEDDSQGPAAIDYSSLLQEDEFHKVADSTIQDLQEK 110


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